RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 LDB1Q86U70 411 aaPredicted RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 OTUD6BQ8N6M0 293 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 GALNT6Q8NCL4 622 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 PHC3Q8NDX5 983 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 OR4E2Q8NGC2 313 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 ELMO1Q92556 727 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 HDAC10Q969S8 669 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.44□□□□□ -0.9
USP54-207ENST00000451492 KIAA1143Q96AT1 154 aaPredicted RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 STAMBPL1Q96FJ0 436 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 LINC00615Q96LM1 132 aaPredicted RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 PPM1MQ96MI6 270 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 KLHL25Q9H0H3 589 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 XKR8Q9H6D3 395 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 KIR3DX1Q9H7L2 352 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 GPN2Q9H9Y4 310 aaPredicted RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 FBXO8Q9NRD0 319 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 SLC24A2Q9UI40 661 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 PILRAQ9UKJ1 303 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 TCAF1Q9Y4C2 921 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 IGLV3-16A0A075B6K0 115 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 TLCD2A6NGC4 264 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 MROH6A6NGR9 719 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 ERI2A8K979 691 aaKnown RBP9.43□□□□□ -0.9
USP54-207ENST00000451492 TIAF1O95411 115 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 DLGAP3O95886 979 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 FOLR1P15328 257 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 CDH3P22223 829 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 NSG1P42857 185 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 KPNA2P52292 529 aaKnown RBP9.43□□□□□ -0.9
USP54-207ENST00000451492 PRKAA1Q13131 559 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 SEMA3AQ14563 771 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 GPR19Q15760 415 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 CCNG2Q16589 344 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 FASTKD1Q53R41 847 aaKnown RBP9.43□□□□□ -0.9
USP54-207ENST00000451492 ATP1A1-AS1Q5TC04 95 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 C16orf46Q6P387 395 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 ZNF449Q6P9G9 518 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 PPP1R3BQ86XI6 285 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 OR5AR1Q8NGP9 310 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 HEXDCQ8WVB3 486 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
USP54-207ENST00000451492 MAIP1Q8WWC4 291 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 LCN9Q8WX39 176 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 MS4A14Q96JA4 679 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 ZPBPQ9BS86 351 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 B3GNT4Q9C0J1 378 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 OR52A5Q9H2C5 316 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 GRPEL1Q9HAV7 217 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 CASS4Q9NQ75 786 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 CHRAC1Q9NRG0 131 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 TSR3Q9UJK0 312 aaKnown RBP9.43□□□□□ -0.9
USP54-207ENST00000451492 PLAGL1Q9UM63 463 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 TDRKHQ9Y2W6 561 aaKnown RBP9.43□□□□□ -0.9
USP54-207ENST00000451492 HEBP2Q9Y5Z4 205 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 COLEC10Q9Y6Z7 277 aa9.43□□□□□ -0.9
USP54-207ENST00000451492 KLHL33A6NCF5 533 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 PYCARD-AS1I3L0S3 204 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 BTN3A1O00481 513 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 TOX3O15405 576 aaPredicted RBP9.42□□□□□ -0.9
USP54-207ENST00000451492 KATNA1O75449 491 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 SPAG6O75602 509 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 SUN1O94901 812 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 FTH1P02794 183 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 OR56A5P0C7T3 313 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 NELFEP18615 380 aaKnown RBP9.42□□□□□ -0.9
USP54-207ENST00000451492 ADRA1DP25100 572 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 MGAT1P26572 445 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 NDUFS1P28331 727 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 DLSTP36957 453 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 NFKB2Q00653 900 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 NFATC3Q12968 1075 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 ITIH4Q14624 930 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 TBR1Q16650 682 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 LINC00303Q3SY05 128 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 CAPRIN2Q6IMN6 1127 aaKnown RBP9.42□□□□□ -0.9
USP54-207ENST00000451492 CES3Q6UWW8 571 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 ZNF662Q6ZS27 426 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 KRT222Q8N1A0 295 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 ACVR1CQ8NER5 493 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 OR52E1Q8NGJ3 308 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 OR4L1Q8NH43 312 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 LKAAEAR1Q8TD35 194 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 KLHL6Q8WZ60 621 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 STARD8Q92502 1023 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 UBXN4Q92575 508 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 RANBP9Q96S59 729 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 AP1M1Q9BXS5 423 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 SRMSQ9H3Y6 488 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 PDE7BQ9NP56 450 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 CATSPERZQ9NTU4 200 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 SYBUQ9NX95 663 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 EPHA6Q9UF33 1036 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 CIDEBQ9UHD4 219 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 IL17BQ9UHF5 180 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 ANAPC5Q9UJX4 755 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 CROTQ9UKG9 612 aa9.42□□□□□ -0.9
USP54-207ENST00000451492 RARRES3Q9UL19 164 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms