RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 DOLKQ9UPQ8 538 aa7.4□□□□□ -1.22
AC004540.1-206ENST00000448056 DNAJC16Q9Y2G8 782 aa7.4□□□□□ -1.22
AC004540.1-206ENST00000448056 DHRS7Q9Y394 339 aa7.4□□□□□ -1.22
AC004540.1-206ENST00000448056 PCDHGB2Q9Y5G2 931 aa7.4□□□□□ -1.22
AC004540.1-206ENST00000448056 IKBKGQ9Y6K9 419 aa7.4□□□□□ -1.22
AC004540.1-206ENST00000448056 PLXNB3Q9ULL4 1909 aa7.4□□□□□ -1.23
AC004540.1-206ENST00000448056 CACNA1EQ15878 2313 aa7.4□□□□□ -1.23
AC004540.1-206ENST00000448056 OTOGLQ3ZCN5 2332 aa7.4□□□□□ -1.23
AC004540.1-206ENST00000448056 PI4KAP42356 2102 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 FAM95CA0A1B0GW59 222 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC5A10A0PJK1 596 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 A6NCN8 305 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 C4orf47A7E2U8 309 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 E5RI56 91 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 TRIM38O00635 465 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 LIN7AO14910 233 aaPredicted RBP7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SNX2O60749 519 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 VPS26AO75436 327 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 GPC4O75487 556 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 EML2O95834 649 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 APOA4P06727 396 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 INHBAP08476 426 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 ITGA2BP08514 1039 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 NUDT17P0C025 328 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 GIMD1P0DJR0 217 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 CD59P13987 128 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SAT1P21673 171 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 FDXRP22570 491 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 RPL10P27635 214 aaKnown RBP7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 PDHA2P29803 388 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SERPINB9P50453 376 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 LIMK2P53671 638 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 TAS2R39P59534 338 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 PLOD1Q02809 727 aaPredicted RBP7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 HSPA14Q0VDF9 509 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 RPA4Q13156 261 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 DEFB133Q30KQ1 61 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 PLEKHS1Q5SXH7 462 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 LGSNQ5TDP6 509 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 MROH9Q5TGP6 573 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 AGAP9Q5VTM2 703 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 FAM45BPQ6NSW5 357 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 UGT3A1Q6NUS8 523 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 IYDQ6PHW0 289 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 OGFOD3Q6PK18 319 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 ABRAXAS1Q6UWZ7 409 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 WASH2PQ6VEQ5 465 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 CEP97Q8IW35 865 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 IQCKQ8N0W5 287 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SIDT2Q8NBJ9 832 aaKnown RBP7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 OR2W6PQ8NHA6 318 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 FAM45AQ8TCE6 357 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 HM13Q8TCT9 377 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 INPP5DQ92835 1189 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 GPR21Q99679 349 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 GPR22Q99680 433 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC30A3Q99726 388 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 OLFM1Q99784 485 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 EDEM2Q9BV94 578 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 DPEP2Q9H4A9 486 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 OSGEPL1Q9H4B0 414 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 COG4Q9H9E3 785 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 PPCSQ9HAB8 311 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SARS2Q9NP81 518 aaKnown RBP7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 WASH6PQ9NQA3 447 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 NLGN3Q9NZ94 848 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC24A2Q9UI40 661 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 SLC39A10Q9ULF5 831 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 CDYLQ9Y232 598 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 WDR37Q9Y2I8 494 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 NFS1Q9Y697 457 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 EP300Q09472 2414 aaPredicted RBP7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 PCDH15Q96QU1 1955 aa7.39□□□□□ -1.23
AC004540.1-206ENST00000448056 TRBV23OR9-2A0A075B6M9 112 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 ERVH48-1M5A8F1 160 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 FFAR2O15552 330 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 KRT38O76015 456 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 SNRPAP09012 282 aaKnown RBP7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 CBSLP0DN79 551 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 F3P13726 295 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 BRAFP15056 766 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 H2AFXP16104 143 aaPredicted RBP7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 CNTFP26441 200 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 ACADLP28330 430 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 CBSP35520 551 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 PREPP48147 710 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 PGGT1BP53609 377 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 IFFO1Q0D2I5 559 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 BOP1Q14137 746 aaKnown RBP7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 GBX1Q14549 363 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 USP10Q14694 798 aaKnown RBP7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 CLCA4Q14CN2 919 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 RASA2Q15283 850 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 TMED2Q15363 201 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 SEPT7Q16181 437 aaKnown RBP7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 UAP1L1Q3KQV9 507 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 SYTL3Q4VX76 610 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 ACSBG2Q5FVE4 666 aa7.38□□□□□ -1.23
AC004540.1-206ENST00000448056 STPG1Q5TH74 334 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms