RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ALOX15BO15296 676 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 RASA4O43374 803 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 THAP12O43422 761 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 DNAJB6O75190 326 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ENDOD1O94919 500 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 VENTXO95231 258 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 MT-CO1P00395 513 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 PIGRP01833 764 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 FGF5P12034 268 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 IFNAR1P17181 557 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 PTMSP20962 102 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 RPA1P27694 616 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ADORA2BP29275 332 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 NEK3P51956 506 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 EPHB1P54762 984 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 GFERP55789 205 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 SLC25A3Q00325 362 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 GPS2Q13227 327 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 IL11RAQ14626 422 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 NFATC4Q14934 902 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 KLHL40Q2TBA0 621 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 LRRC73Q5JTD7 316 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 MPP7Q5T2T1 576 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 NADSYN1Q6IA69 706 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 RPUSD3Q6P087 351 aaKnown RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 WDR74Q6RFH5 385 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ARSKQ6UWY0 536 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 Q6ZRM9 215 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 LINC00696Q6ZRV3 163 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ADGRE4PQ86SQ3 457 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 MEX3DQ86XN8 651 aaKnown RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 DOLPP1Q86YN1 238 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 CLYBLQ8N0X4 340 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 D2HGDHQ8N465 521 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 MARVELD2Q8N4S9 558 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 OR5AN1Q8NGI8 311 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 OR2A12Q8NGT7 310 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 OR10G6Q8NH81 332 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 SLC2A14Q8TDB8 520 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ASB12Q8WXK4 309 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 CCDC127Q96BQ5 260 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ZMYND19Q96E35 227 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 NSMCE3Q96MG7 304 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 WDR92Q96MX6 357 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 BEX2Q9BXY8 128 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 NELFAQ9H3P2 528 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 FGF22Q9HCT0 170 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 AGO2Q9UKV8 859 aaKnown RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ITGA11Q9UKX5 1188 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 RNF6Q9Y252 685 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 ATP8B3O60423 1300 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 CCDC196A0A1B0GTZ2 297 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 TMEM110-MUSTN1A8MSY1 372 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 A8MV72 311 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 LDB2O43679 373 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 MATN4O95460 622 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 F10P00742 488 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 CCNB1P14635 433 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 GSPT1P15170 499 aaKnown RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 PTX3P26022 381 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 HTR1BP28222 390 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 KIR2DL3P43628 341 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 PEX5P50542 639 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 KIF11P52732 1056 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 FOXL2P58012 376 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 PDE1BQ01064 536 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 PMP22Q01453 160 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 SLC6A3Q01959 620 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 NFATC2Q13469 925 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 SEPT7Q16181 437 aaKnown RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 EFHC1Q5JVL4 640 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 GALNT17Q6IS24 598 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 SLC30A9Q6PML9 568 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 IGFL2Q6UWQ7 119 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 PRSS57Q6UWY2 283 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 Q6ZPB1 254 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 C1orf186Q6ZWK4 172 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 MRGPREQ86SM8 312 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 PPP1R3BQ86XI6 285 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 LDLRAD3Q86YD5 345 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 SLC38A9Q8NBW4 561 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 HJURPQ8NCD3 748 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 OR5B17Q8NGF7 314 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 ZNF830Q96NB3 372 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 NAP1L4Q99733 375 aaKnown RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 MLPHQ9BV36 600 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 TMEM60Q9H2L4 133 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 ZHX3Q9H4I2 956 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 ZSCAN16Q9H4T2 348 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 ZNF703Q9H7S9 590 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 MMRN2Q9H8L6 949 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 MSL2Q9HCI7 577 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 CSNK1G1Q9HCP0 422 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 PDE11AQ9HCR9 933 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 FAM49BQ9NUQ9 324 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 CLIC5Q9NZA1 410 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 ABI3Q9P2A4 366 aa4.84□□□□□ -1.63
SDCBP-205ENST00000447267 HBS1LQ9Y450 684 aaKnown RBP4.84□□□□□ -1.63
SDCBP-205ENST00000447267 TNPO3Q9Y5L0 923 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms