RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 RALGDSQ12967 914 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 LRP8Q14114 963 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 FLOT2Q14254 428 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 GRM2Q14416 872 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 LRRC36Q1X8D7 754 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ATP6AP1LQ52LC2 224 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 CAPRIN2Q6IMN6 1127 aaKnown RBP9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 LIPIQ6XZB0 460 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 SPATA19Q7Z5L4 167 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ETFBKMTQ8IXQ9 262 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 AP2M1Q96CW1 435 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 MTFMTQ96DP5 389 aaKnown RBP9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 HIST1H2AHQ96KK5 128 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 HIST1H2AJQ99878 128 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 TMEM79Q9BSE2 394 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 H2AFJQ9BTM1 129 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 RIC8BQ9NVN3 520 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 NMRK1Q9NWW6 199 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 XIRP2A4UGR9 3374 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 KRT87PA6NCN2 255 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 EPOPA6NHQ4 379 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 K7EPI3 171 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ANGPT2O15123 496 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 MAP3K7O43318 606 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 STK16O75716 305 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 PRNPP04156 253 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ACADVLP49748 655 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 MS4A2Q01362 244 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF234Q14588 700 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ABRAXAS2Q15018 415 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 GSTA3Q16772 222 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 C9orf64Q5T6V5 341 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 AAGABQ6PD74 315 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 DPPA4Q7L190 304 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 TRAM1L1Q8N609 369 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 BHLHE22Q8NFJ8 381 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 PIP4K2CQ8TBX8 421 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 DNAJC9Q8WXX5 260 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 JADE3Q92613 823 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 LRCH3Q96II8 777 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZSCAN5AQ9BUG6 496 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 TRIM54Q9BYV2 358 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 DKK3Q9UBP4 350 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 SUN2Q9UH99 717 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNHIT2Q9UHR6 403 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 CROTQ9UKG9 612 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 PDE10AQ9Y233 779 aa9.34□□□□□ -0.91
COL6A4P1-201ENST00000446690 TSPAN11A1L157 253 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 LOC730098B7Z3J9 87 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 WNT9AO14904 365 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 LINC01565O15544 149 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 EPB42P16452 691 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 PBLDP30039 288 aaPredicted RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 MMP12P39900 470 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 CASP2P42575 452 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 UFM1P61960 85 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 ABRQ12979 859 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 CDC16Q13042 620 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 NR6A1Q15406 480 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 XKR7Q5GH72 579 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 C6orf136Q5SQH8 315 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 HENMT1Q5T8I9 393 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 AP1ARQ63HQ0 302 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 Q6ZSR9 355 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 MMAAQ8IVH4 418 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 YAF2Q8IY57 180 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 RAVER1Q8IY67 606 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 SFRP1Q8N474 314 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 PCYOX1LQ8NBM8 494 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 BTN2A2Q8WVV5 523 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 OR8D1Q8WZ84 308 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 PYCR2Q96C36 320 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 TEX37Q96LM6 180 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 FAM83CQ9BQN1 747 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 PCDHAC1Q9H158 963 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 PARVBQ9HBI1 364 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 SPAG4Q9NPE6 437 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 HPS4Q9NQG7 708 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 SDR39U1Q9NRG7 319 aaPredicted RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 KLQ9UEF7 1012 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 NDUFAF1Q9Y375 327 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 RNF11Q9Y3C5 154 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 LRRC42Q9Y546 428 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 GPR45Q9Y5Y3 372 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 EDDM13A0A1B0GTR0 161 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 TMEM202A6NGA9 273 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 LIN7AO14910 233 aaPredicted RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 CAPN3P20807 821 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 KCNK10P57789 538 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 DCDC1P59894 354 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 ERVK-8P63133 956 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 MRPS22P82650 360 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRAF3Q13114 568 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 CAPRIN1Q14444 709 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 GAB4Q2WGN9 574 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 HNRNPA1L2Q32P51 320 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 VITQ6UXI7 678 aa9.33□□□□□ -0.92
COL6A4P1-201ENST00000446690 TECPR1Q7Z6L1 1165 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms