RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 RAB41Q5JT25 222 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 PLEKHS1Q5SXH7 462 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 ARHGEF16Q5VV41 709 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 HAUS6Q7Z4H7 955 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 ZNF554Q86TJ5 538 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 DNAJC22Q8N4W6 341 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 LRRC59Q96AG4 307 aaKnown RBP5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 ABHD6Q9BV23 337 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 SIX2Q9NPC8 291 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 HAUS2Q9NVX0 235 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 ARHGEF38Q9NXL2 777 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 NPAP1Q9NZP6 1156 aa5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 SEC63Q9UGP8 760 aaKnown RBP5.33□□□□□ -1.56
ATP13A3-204ENST00000446356 IGKV3D-15A0A087WSY6 115 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 CTDSP2O14595 271 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 TSPAN9O75954 239 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 ACP2P11117 423 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 IRF3Q14653 427 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 FCN2Q15485 313 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 C14orf177Q52M58 125 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 CORO6Q6QEF8 472 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 C17orf53Q8N3J3 647 aaPredicted RBP5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 DDHD1Q8NEL9 900 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 TRAF4Q9BUZ4 470 aaPredicted RBP5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 PSD3Q9NYI0 1048 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 LARSQ9P2J5 1176 aaKnown RBP5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 SUCLA2Q9P2R7 463 aaPredicted RBP5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 HACL1Q9UJ83 578 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 ZNF148Q9UQR1 794 aa5.32□□□□□ -1.56
ATP13A3-204ENST00000446356 A6NCN8 305 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 DOK2O60496 412 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 WDHD1O75717 1129 aaPredicted RBP5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 EML2O95834 649 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 SUOXP51687 545 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 CREB5Q02930 508 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 CXCL9Q07325 125 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 SZRD1Q7Z422 152 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 MCUQ8NE86 351 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 SGK494Q96LW2 274 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 RTP3Q9BQQ7 232 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 SPATC1LQ9H0A9 340 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 OSGEPL1Q9H4B0 414 aa5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATP13A3-204ENST00000446356 PRR32B1ATL7 298 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 TO15178 435 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 SLC22A2O15244 555 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 SH3BP5O60239 455 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 PRAMEF11O60813 436 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 EDN1P05305 212 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 HMBSP08397 361 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 ZNF883P0CG24 379 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 GJA1P17302 382 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 GCH1P30793 250 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 CEACAM8P31997 349 aaPredicted RBP5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 PNLIPRP2P54317 469 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 SIRPAP78324 504 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 CHAF1BQ13112 559 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 ZFP69Q49AA0 526 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 DUSP28Q4G0W2 176 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 CPSF7Q8N684 471 aaKnown RBP5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 ERLEC1Q96DZ1 483 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 ART5Q96L15 291 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 SDF4Q9BRK5 362 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 KIFC3Q9BVG8 833 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 PELI2Q9HAT8 420 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 FLRT3Q9NZU0 649 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 PLAGL1Q9UM63 463 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 MRPS28Q9Y2Q9 187 aaKnown RBP5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 GRIP1Q9Y3R0 1128 aa5.3□□□□□ -1.56
ATP13A3-204ENST00000446356 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 A0A1W2PQ09 198 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 ANTXRLA6NF34 631 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 DNM1LO00429 736 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 NR5A2O00482 541 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 SH2B2O14492 632 aaPredicted RBP5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 CEACAM1P13688 526 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 MATR3P43243 847 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 LGALS3BPQ08380 585 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 NR1D2Q14995 579 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 RRS1Q15050 365 aaKnown RBP5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 DHRS7BQ6IAN0 325 aaPredicted RBP5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 ZNF383Q8NA42 475 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 PAPD5Q8NDF8 572 aaKnown RBP5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 OR1J1Q8NGS3 322 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 GIMAP5Q96F15 307 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 OR6C1Q96RD1 312 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 KCNK15Q9H427 330 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 FGF22Q9HCT0 170 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 ACKR4Q9NPB9 350 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 BLOC1S4Q9NUP1 217 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 VPS28Q9UK41 221 aa5.29□□□□□ -1.56
ATP13A3-204ENST00000446356 LOC100509620A0A075B734 347 aa5.28□□□□□ -1.56
ATP13A3-204ENST00000446356 ANKRD18BA2A2Z9 1011 aa5.28□□□□□ -1.56
ATP13A3-204ENST00000446356 SLCO1B7G3V0H7 640 aa5.28□□□□□ -1.56
ATP13A3-204ENST00000446356 AVILO75366 819 aa5.28□□□□□ -1.56
ATP13A3-204ENST00000446356 TRMUO75648 421 aaKnown RBP5.28□□□□□ -1.56
ATP13A3-204ENST00000446356 SAT1P21673 171 aa5.28□□□□□ -1.56
ATP13A3-204ENST00000446356 PDX1P52945 283 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms