RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SOCS7O14512 581 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 MATN3O15232 486 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 RGS10O43665 173 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 RECQL5O94762 991 aaPredicted RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 DIRAS1O95057 198 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 PRR35P0CG20 571 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 FMO4P31512 558 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 GRIK1P39086 918 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 GBX1Q14549 363 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 ARMCX2Q7L311 632 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 DEPDC4Q8N2C3 294 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 SVOPLQ8N434 492 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 TSPEARQ8WU66 669 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 RHBDF1Q96CC6 855 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 DEPDC7Q96QD5 511 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 BRINP2Q9C0B6 783 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 OR2B2Q9GZK3 357 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 USE1Q9NZ43 259 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 PKP3Q9Y446 797 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 LINC00854A0A1B0GVQ3 168 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 NPEPPSL1A6NEC2 478 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 AIREO43918 545 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 ECI2O75521 394 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 GJB3O75712 270 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 MOCS2O96007 188 aaPredicted RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 HOXD8P13378 290 aaPredicted RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 NAT1P18440 290 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 FDXRP22570 491 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 HTR6P50406 440 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 OR2B6P58173 313 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 GTDC1Q4AE62 458 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 IL17RDQ8NFM7 739 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 OR5K1Q8NHB7 308 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 ZNF560Q96MR9 790 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 TMEM246Q9BRR3 403 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 TRIM39Q9HCM9 518 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 PCDHGB1Q9Y5G3 927 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 METTL15A6NJ78 407 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 PIRO00625 290 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 VPS4BO75351 444 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 PTTG1O95997 202 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 GADD45AP24522 165 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
VPS52-212ENST00000445902 RYKP34925 604 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 TAF6P49848 677 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 IHHQ14623 411 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 AGAP6Q5VW22 663 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 PAQR3Q6TCH7 311 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.73□□□□□ -0.21
VPS52-212ENST00000445902 GCNT7Q6ZNI0 430 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 ADHFE1Q8IWW8 467 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 OR52B6Q8NGF0 335 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 OR6F1Q8NGZ6 308 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 ZNF599Q96NL3 588 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 AGAP4Q96P64 663 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 SMOQ99835 787 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 DUSP21Q9H596 190 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 CNGB3Q9NQW8 809 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 NEUROG3Q9Y4Z2 214 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 GMPPBQ9Y5P6 360 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 CXCR6O00574 342 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 SLC2A3P11169 496 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 AIF1P55008 147 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 DSC2Q02487 901 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 ZFP69Q49AA0 526 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 XKR7Q5GH72 579 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 ZCCHC8Q6NZY4 707 aaKnown RBP13.73□□□□□ -0.21
VPS52-212ENST00000445902 GIPC2Q8TF65 315 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 BCL7BQ9BQE9 202 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 ACTL8Q9H568 366 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 EIF2B4Q9UI10 523 aaKnown RBP13.73□□□□□ -0.21
VPS52-212ENST00000445902 ARL5AQ9Y689 179 aa13.73□□□□□ -0.21
VPS52-212ENST00000445902 KMOO15229 486 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 SERPINA1P01009 418 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 KRT20P35900 424 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 PTGR1Q14914 329 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 ZNF484Q5JVG2 852 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 CEP68Q76N32 757 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 DPP9Q86TI2 863 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 GALNT12Q8IXK2 581 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 ZNF548Q8NEK5 533 aaPredicted RBP13.72□□□□□ -0.21
VPS52-212ENST00000445902 BLOC1S5Q8TDH9 187 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 ERVK13-1Q9NX77 482 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 PAQR5Q9NXK6 330 aaPredicted RBP13.72□□□□□ -0.21
VPS52-212ENST00000445902 FBXL12Q9NXK8 326 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 ZIM2Q9NZV7 527 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 CARD8Q9Y2G2 431 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 ZSWIM8A7E2V4 1837 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 SAGE2PA6NJ88 616 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 SLC16A6O15403 523 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 SCO2O43819 266 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 CD4P01730 458 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 LGALS2P05162 132 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 S100A5P33763 92 aa13.72□□□□□ -0.21
VPS52-212ENST00000445902 PON2Q15165 354 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms