RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 WWP1Q9H0M0 922 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 RUVBL2Q9Y230 463 aaKnown RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 NEMP2A6NFY4 417 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 PRR19A6NJB7 356 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 LMO7DNF2Z398 122 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 SLC35G4P0C7Q5 338 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 ENO3P13929 434 aaPredicted RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 ZNF37AP17032 561 aaPredicted RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 ATP5DP30049 168 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 MAGEA12P43365 314 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 CSHL1Q14406 222 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 GBX1Q14549 363 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 CYHR1Q6ZMK1 362 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 PIWIL4Q7Z3Z4 852 aaKnown RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 TRABD2AQ86V40 505 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 SLC22A15Q8IZD6 547 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 PDLIM5Q96HC4 596 aaKnown RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 CABS1Q96KC9 395 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 UBXN10Q96LJ8 280 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 UNKQ9C0B0 810 aaKnown RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 OR52A5Q9H2C5 316 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 SEMA4GQ9NTN9 838 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 PCMTD2Q9NV79 361 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 NOVA2Q9UNW9 492 aaKnown RBP17.04■□□□□ 0.32
SGCE-206ENST00000445866 WDR37Q9Y2I8 494 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 CSNK1G3Q9Y6M4 447 aa17.04■□□□□ 0.32
SGCE-206ENST00000445866 MYLKQ15746 1914 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 KMT2EQ8IZD2 1858 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 IFRD1O00458 451 aaPredicted RBP17.03■□□□□ 0.32
SGCE-206ENST00000445866 YKT6O15498 198 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 EML2O95834 649 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 SLC26A3P40879 764 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 HALP42357 657 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 CSRP3P50461 194 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 IRF9Q00978 393 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 FAM83EQ2M2I3 478 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 DEFB133Q30KQ1 61 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 UAP1L1Q3KQV9 507 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 ABRAXAS1Q6UWZ7 409 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 WASH2PQ6VEQ5 465 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 GATAD2AQ86YP4 633 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 C4orf33Q8N1A6 199 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 MYO1HQ8N1T3 1032 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 MINDY1Q8N5J2 469 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 GLMNQ92990 594 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 ARL8AQ96BM9 186 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 NXNL1Q96CM4 212 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 WASH6PQ9NQA3 447 aa17.03■□□□□ 0.32
SGCE-206ENST00000445866 MYO15AQ9UKN7 3530 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 EIF3FO00303 357 aaPredicted RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 WISP3O95389 354 aaPredicted RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 TSPAN12O95859 305 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 EPHA8P29322 1005 aaPredicted RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 CCT5P48643 541 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 CLCA4Q14CN2 919 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 AGAP9Q5VTM2 703 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 CAPRIN2Q6IMN6 1127 aaKnown RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 IYDQ6PHW0 289 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 LVRNQ6Q4G3 990 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 SH2D5Q6ZV89 423 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 PHC3Q8NDX5 983 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 SAP25Q8TEE9 199 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 KCTD4Q8WVF5 259 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 TFGQ92734 400 aaPredicted RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 TSNARE1Q96NA8 513 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 FOPNLQ96NB1 174 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 SMC6Q96SB8 1091 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 INSM2Q96T92 566 aaPredicted RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 DERL2Q9GZP9 239 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 NMRAL1Q9HBL8 299 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 SCHIP1Q9P0W5 487 aaPredicted RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 PCOLCE2Q9UKZ9 415 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 CFAP20Q9Y6A4 193 aaKnown RBP17.02■□□□□ 0.32
SGCE-206ENST00000445866 PLXNA2O75051 1894 aa17.02■□□□□ 0.32
SGCE-206ENST00000445866 LNP1A1A4G5 178 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 FFAR2O15552 330 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 KLHL2O95198 593 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 LTA4HP09960 611 aaKnown RBP17.01■□□□□ 0.31
SGCE-206ENST00000445866 MPC1LP0DKB6 136 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 COL6A2P12110 1019 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 BRAFP15056 766 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 ACADLP28330 430 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 CCT8P50990 548 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 DLG1Q12959 904 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 KRT33BQ14525 404 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 CSRP2Q16527 193 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 TNFAIP8L3Q5GJ75 292 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 LRRC8EQ6NSJ5 796 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 NEK10Q6ZWH5 1172 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 PDZD3Q86UT5 571 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 EXOC3L1Q86VI1 746 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 PLD6Q8N2A8 252 aaKnown RBP17.01■□□□□ 0.31
SGCE-206ENST00000445866 ZDHHC1Q8WTX9 485 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 ASB11Q8WXH4 323 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 C12orf66Q96MD2 445 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 SH3GL2Q99962 352 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 IGSF5Q9NSI5 407 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 ZNF358Q9NW07 568 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 SENP1Q9P0U3 644 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms