RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SIDT2Q8NBJ9 832 aaKnown RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 AHCYL2Q96HN2 611 aaKnown RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 IL12RB2Q99665 862 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 DPY30Q9C005 99 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 ZC4H2Q9NQZ6 224 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 MKS1Q9NXB0 559 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 SCHIP1Q9P0W5 487 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 FAM32AQ9Y421 112 aaKnown RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 USP3Q9Y6I4 520 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 A0A0U1RQS6 177 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 M0QZQ0 153 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 CACNB4O00305 520 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 PIP5K1BO14986 540 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 TIPRLO75663 272 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 NTRK1P04629 796 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 PRSS56P0CW18 603 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 SLC5A2P31639 672 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 PGFP49763 221 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 SNAP47Q5SQN1 464 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 PPP4R4Q6NUP7 873 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 ARHGAP12Q8IWW6 846 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 SLC39A11Q8N1S5 342 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 OR2AP1Q8NGE2 309 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 FIG4Q92562 907 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 SUV39H2Q9H5I1 410 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 SAGE1Q9NXZ1 904 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 KIF17Q9P2E2 1029 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 GULP1Q9UBP9 304 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 WDR47O94967 919 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 CLDN7O95471 211 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 MAGP20916 626 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 FBXW4P57775 412 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 CLCQ05315 142 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 BNIP3Q12983 259 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 PPP1R3AQ16821 1122 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 AASDHQ4L235 1098 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 TMIGD2Q96BF3 282 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 RMND5BQ96G75 393 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 TOX2Q96NM4 488 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 CITED4Q96RK1 184 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 OLFM1Q99784 485 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 LINC00597Q9H2U6 94 aa10.44□□□□□ -0.74
TOP3B-210ENST00000444502 CXXC1Q9P0U4 656 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 MTF2Q9Y483 593 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-210ENST00000444502 GSAPA4D1B5 854 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 LRRC14BA6NHZ5 514 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 KPNA4O00629 521 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 VILLO15195 856 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 DNAJA2O60884 412 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 FTH1P02794 183 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CTSAP10619 480 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 HOXD8P13378 290 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 FASP25445 335 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 GRSF1Q12849 480 aaKnown RBP eCLIP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 OTUD1Q5VV17 481 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 GPRIN3Q6ZVF9 776 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 UBE2R2Q712K3 238 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 PGAM4Q8N0Y7 254 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 COL26A1Q96A83 441 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CLSTN3Q9BQT9 956 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 MTG2Q9H4K7 406 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 TRPC4Q9UBN4 977 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 PADI4Q9UM07 663 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 KANSL1LA0AUZ9 987 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 FAM149AA5PLN7 773 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 HIDE1A8MVS5 230 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 H3BM21 787 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 NPHS1O60500 1241 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 SERPINB7O75635 380 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 MCCD1P59942 119 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CYP4F2P78329 520 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CYP2A13Q16696 494 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 PLEKHG6Q3KR16 790 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 MTX3Q5HYI7 312 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 ADAMTSL2Q86TH1 951 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 TMEM25Q86YD3 366 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CILP2Q8IUL8 1156 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 C2CD4AQ8NCU7 369 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 IRF7Q92985 503 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 PGAP3Q96FM1 320 aaPredicted RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 PLEKHA8Q96JA3 519 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 NSMCE2Q96MF7 247 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 ASB2Q96Q27 587 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 KCNA7Q96RP8 456 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 TRMOQ9BU70 441 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 POLG2Q9UHN1 485 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 EIF2B4Q9UI10 523 aaKnown RBP10.43□□□□□ -0.74
TOP3B-210ENST00000444502 G3V2L1 256 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CDC7O00311 574 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CCRL2O00421 344 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 OR4F21O95013 312 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 RASGRP1O95267 797 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 SEC24AO95486 1093 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 ATP6V1B2P21281 511 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 DGKEP52429 567 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CHRNB3Q05901 458 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 ZNF423Q2M1K9 1284 aa10.43□□□□□ -0.74
TOP3B-210ENST00000444502 CARD16Q5EG05 197 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms