RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TAS2R42Q7RTR8 314 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 HOOK3Q86VS8 718 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 SYCE1Q8N0S2 351 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 D2HGDHQ8N465 521 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 ACVR1CQ8NER5 493 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 LCN9Q8WX39 176 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 C19orf43Q9BQ61 176 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 GORASP1Q9BQQ3 440 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 GPR87Q9BY21 358 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 SLC7A5P2Q9GIP4 190 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 SRMSQ9H3Y6 488 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 ACTL8Q9H568 366 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 FAM96AQ9H5X1 160 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 LRRC40Q9H9A6 602 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 KCND1Q9NSA2 647 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 ZDHHC3Q9NYG2 299 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 AMFRQ9UKV5 643 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 TP53TG5Q9Y2B4 290 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 KCNMB2Q9Y691 235 aa11.48□□□□□ -0.57
TTC28-203ENST00000442232 MIF4GDA9UHW6 222 aaKnown RBP11.47□□□□□ -0.57
TTC28-203ENST00000442232 PSMD3O43242 534 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 GAS8O95995 478 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 NTRK1P04629 796 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 KLK3P07288 261 aaPredicted RBP11.47□□□□□ -0.57
TTC28-203ENST00000442232 GSTM1P09488 218 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 POLR2CP19387 275 aaPredicted RBP11.47□□□□□ -0.57
TTC28-203ENST00000442232 PTPN4P29074 926 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 CA5AP35218 305 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 ARCN1P48444 511 aaKnown RBP11.47□□□□□ -0.57
TTC28-203ENST00000442232 ZNF75DP51815 510 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 VAV2P52735 878 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 PMS2P54278 862 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 GSDMDP57764 484 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 XIAPP98170 497 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 GSTM4Q03013 218 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 OLIG2Q13516 323 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 SPARCL1Q14515 664 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 GPR19Q15760 415 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 P3H1Q32P28 736 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 PEX26Q7Z412 305 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 SYVN1Q86TM6 617 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 TEX19Q8NA77 164 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
TTC28-203ENST00000442232 OR4E2Q8NGC2 313 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 NAT14Q8WUY8 206 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 CPT1BQ92523 772 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 MR1Q95460 341 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.47□□□□□ -0.57
TTC28-203ENST00000442232 FERD3LQ96RJ6 166 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 LATS2Q9NRM7 1088 aa11.47□□□□□ -0.57
TTC28-203ENST00000442232 G3BP2Q9UN86 482 aaKnown RBP11.47□□□□□ -0.57
TTC28-203ENST00000442232 C17orf113A0A1B0GUU1 675 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 F8W8V4 182 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 QSOX1O00391 747 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 CYP2A7P20853 494 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 ACRV1P26436 265 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.57
TTC28-203ENST00000442232 PARP6Q2NL67 630 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 SYTL3Q4VX76 610 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 TCTN3Q6NUS6 607 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 ASB18Q6ZVZ8 466 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 SERPINA9Q86WD7 417 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 THAP4Q8WY91 577 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 N4BP2L2Q92802 583 aaPredicted RBP11.46□□□□□ -0.57
TTC28-203ENST00000442232 CLIP3Q96DZ5 547 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 DNAJC1Q96KC8 554 aaKnown RBP11.46□□□□□ -0.57
TTC28-203ENST00000442232 TLR10Q9BXR5 811 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 MVB12BQ9H7P6 319 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 COG4Q9H9E3 785 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 ARNT2Q9HBZ2 717 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 SYTL2Q9HCH5 934 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 C1GALT1Q9NS00 363 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 POMT2Q9UKY4 750 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 BTRCQ9Y297 605 aa11.46□□□□□ -0.57
TTC28-203ENST00000442232 HECTD1Q9ULT8 2610 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 RCCD1A6NED2 376 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 SLC9B1P1A6NJY1 282 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 AGAP14A8MT82 685 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 C2orf74A8MZ97 194 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 TMEM150CB9EJG8 249 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 CCL22O00626 93 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 KDM1AO60341 852 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 AP2A2O94973 939 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 FTH1P02794 183 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 PREPP48147 710 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 CD151P48509 253 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 LMAN1P49257 510 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 FOXK1P85037 733 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 CACNG1Q06432 222 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 KIF5AQ12840 1032 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 RPA4Q13156 261 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 LAMB3Q13751 1172 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 POU6F1Q14863 301 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 UGT8Q16880 541 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 CAPRIN2Q6IMN6 1127 aaKnown RBP11.45□□□□□ -0.58
TTC28-203ENST00000442232 AADACL2Q6P093 401 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 FAM199XQ6PEV8 388 aaPredicted RBP11.45□□□□□ -0.58
TTC28-203ENST00000442232 CERS6Q6ZMG9 384 aa11.45□□□□□ -0.58
TTC28-203ENST00000442232 LINC00523Q86TU6 105 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms