RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 MS4A10Q96PG2 267 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 ABHD6Q9BV23 337 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 TRMT61BQ9BVS5 477 aaKnown RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 FNDC11Q9BVV2 318 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 DPAGT1Q9H3H5 408 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 TFB2MQ9H5Q4 396 aaKnown RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 FAM118AQ9NWS6 357 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 GDE1Q9NZC3 331 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 PTTG2Q9NZH5 202 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 CRNNQ9UBG3 495 aaPredicted RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 JRKLQ9Y4A0 524 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.61□□□□□ -1.677e-7■■□□□ 11.9
PFDN4-202ENST00000441080 HEPACAM2A8MVW5 462 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 P2RY10O00398 339 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 XRCC3O43542 346 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 TSPAN1O60635 241 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 MED24O75448 989 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 IGLV2-11P01706 119 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 CBLP22681 906 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 RPS18P62269 152 aaKnown RBP4.6□□□□□ -1.67
PFDN4-202ENST00000441080 PRPF4BQ13523 1007 aaKnown RBP4.6□□□□□ -1.67
PFDN4-202ENST00000441080 IL11RAQ14626 422 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 CBWD6Q4V339 395 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 CBWD3Q5JTY5 395 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 SLC30A6Q6NXT4 461 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 C19orf48Q6RUI8 117 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 KRT74Q7RTS7 529 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 GPALPP1Q8IXQ4 340 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 CRYBG2Q8N1P7 616 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 KCTD6Q8NC69 237 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 OR10S1Q8NGN2 331 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 CFAP61Q8NHU2 1237 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 ZNF473Q8WTR7 871 aaKnown RBP4.6□□□□□ -1.67
PFDN4-202ENST00000441080 ALG14Q96F25 216 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 UHRF2Q96PU4 802 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 NODALQ96S42 347 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 TXLNGYQ9BZA5 131 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 MMP28Q9H239 520 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 GOLPH3LQ9H4A5 285 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 ANAPC2Q9UJX6 822 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 GRIP1Q9Y3R0 1128 aa4.6□□□□□ -1.67
PFDN4-202ENST00000441080 PRKNO60260 465 aaPredicted RBP4.59□□□□□ -1.67
PFDN4-202ENST00000441080 DNTTP04053 509 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 NR3C1P04150 777 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 ACP2P11117 423 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 NR1D1P20393 614 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 CAPZA2P47755 286 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 NR2C2P49116 596 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 PHEXP78562 749 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 PNRC1Q12796 327 aaPredicted RBP4.59□□□□□ -1.67
PFDN4-202ENST00000441080 SNTB1Q13884 538 aaKnown RBP4.59□□□□□ -1.67
PFDN4-202ENST00000441080 SCN5AQ14524 2016 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 C9orf152Q5JTZ5 239 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 CCNYL2Q5T2Q4 361 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 ERMARDQ5T6L9 678 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 SLC26A9Q7LBE3 791 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 TRMT1LQ7Z2T5 733 aaKnown RBP4.59□□□□□ -1.67
PFDN4-202ENST00000441080 CAMKMTQ7Z624 323 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 FAM114A1Q8IWE2 563 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 TSPAN14Q8NG11 270 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 MOSPD2Q8NHP6 518 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 EXD1Q8NHP7 514 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 SPACA9Q96E40 222 aaPredicted RBP4.59□□□□□ -1.67
PFDN4-202ENST00000441080 ZNF354BQ96LW1 612 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 OLFM1Q99784 485 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 KRTAP1-5Q9BYS1 174 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 TBC1D17Q9HA65 648 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 ZNF334Q9HCZ1 680 aaPredicted RBP4.59□□□□□ -1.67
PFDN4-202ENST00000441080 OLFML3Q9NRN5 406 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 OSER1Q9NX31 292 aa4.59□□□□□ -1.67
PFDN4-202ENST00000441080 TCRBV21S2A2A0A5A6 115 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 ANKUB1A6NFN9 424 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 PRR23D1E9PI22 279 aaPredicted RBP4.58□□□□□ -1.68
PFDN4-202ENST00000441080 TIMM44O43615 452 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 PRR23D2P0DMB1 279 aaPredicted RBP4.58□□□□□ -1.68
PFDN4-202ENST00000441080 MSH3P20585 1137 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 THOP1P52888 689 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 AIMP1Q12904 312 aaKnown RBP4.58□□□□□ -1.68
PFDN4-202ENST00000441080 DMP1Q13316 513 aaPredicted RBP4.58□□□□□ -1.68
PFDN4-202ENST00000441080 RASA2Q15283 850 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 LETM2Q2VYF4 491 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 GRTP1Q5TC63 336 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 TMPRSS11FQ6ZWK6 438 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 CUZD1Q86UP6 607 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 LRRC8CQ8TDW0 803 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 SNRNP27Q8WVK2 155 aaKnown RBP4.58□□□□□ -1.68
PFDN4-202ENST00000441080 TEKT4Q8WW24 435 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 STAMBPL1Q96FJ0 436 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 ZBTB20Q9HC78 741 aaPredicted RBP4.58□□□□□ -1.68
PFDN4-202ENST00000441080 EQTNQ9NQ60 294 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 HAO2Q9NYQ3 351 aa4.58□□□□□ -1.68
PFDN4-202ENST00000441080 DDX25Q9UHL0 483 aaKnown RBP4.58□□□□□ -1.68
PFDN4-202ENST00000441080 CNTNAP2Q9UHC6 1331 aa4.57□□□□□ -1.68
PFDN4-202ENST00000441080 A0A0B4J293 547 aa4.57□□□□□ -1.68
PFDN4-202ENST00000441080 TRBC2A0A5B9 178 aa4.57□□□□□ -1.68
PFDN4-202ENST00000441080 PLOD3O60568 738 aa4.57□□□□□ -1.68
PFDN4-202ENST00000441080 SLC22A3O75751 556 aa4.57□□□□□ -1.68
PFDN4-202ENST00000441080 PSMD10O75832 226 aa4.57□□□□□ -1.68
PFDN4-202ENST00000441080 TRUB2O95900 331 aaKnown RBP4.57□□□□□ -1.68
PFDN4-202ENST00000441080 UMODP07911 640 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms