RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 I6L893 689 aaPredicted RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 EIF3FO00303 357 aaPredicted RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 GABRDO14764 452 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 RAD51BO15315 384 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 SLC16A6O15403 523 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 HOXC11O43248 304 aaPredicted RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 NOBOXO60393 691 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 NBNO60934 754 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 SLC22A3O75751 556 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PARNO95453 639 aaKnown RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 KRT8P05787 483 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PRR35P0CG20 571 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CHRNB1P11230 501 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CES1P23141 567 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 IL12AP29459 219 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CD6P30203 668 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 HTR7P34969 479 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 ADRA1AP35348 466 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 POLR2JP52435 117 aaKnown RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 NCS1P62166 190 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 RAB41Q5JT25 222 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CLLU1OSQ5K130 101 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 GPR158Q5T848 1215 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 STEAP3Q658P3 488 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 TMEM207Q6UWW9 146 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 CD300LGQ6UXG3 332 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 GPRIN1Q7Z2K8 1008 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 KIAA1958Q8N8K9 716 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PTGR2Q8N8N7 351 aaPredicted RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 MCFD2Q8NI22 146 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 LGALS12Q96DT0 336 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PCED1BQ96HM7 432 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PAWRQ96IZ0 340 aaKnown RBP11.72□□□□□ -0.53
LTBR-203ENST00000441074 ERVK-18Q9QC07 812 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 C3orf18Q9UK00 162 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 BTRCQ9Y297 605 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
LTBR-203ENST00000441074 PABPN1LA6NDY0 278 aaKnown RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 TBKBP1A7MCY6 615 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 H0Y626 953 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 TRIM16O95361 564 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 SPNP16150 400 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 GGT1P19440 569 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 CASP2P42575 452 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 ST13P50502 369 aaKnown RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 CCL23P55773 120 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 UFM1P61960 85 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 KRR1Q13601 381 aaKnown RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 RSBN1Q5VWQ0 802 aaPredicted RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 DESI1Q6ICB0 168 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 MRPL10Q7Z7H8 261 aaKnown RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 GALNT7Q86SF2 657 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 RALGPS2Q86X27 583 aaPredicted RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 PLD3Q8IV08 490 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 ATPAF2Q8N5M1 289 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 AADATQ8N5Z0 425 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 DBF4BQ8NFT6 615 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 PTERQ96BW5 349 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 REXO5Q96IC2 774 aaKnown RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 SNX18Q96RF0 628 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 KCNA7Q96RP8 456 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 TRIM62Q9BVG3 475 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 BRINP2Q9C0B6 783 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 RNF38Q9H0F5 515 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 TKTL2Q9H0I9 626 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 MMP27Q9H306 513 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 DUSP21Q9H596 190 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 GLOD4Q9HC38 313 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 TBC1D14Q9P2M4 693 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 CARD8Q9Y2G2 431 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 PRG3Q9Y2Y8 225 aaPredicted RBP11.71□□□□□ -0.53
LTBR-203ENST00000441074 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.53
LTBR-203ENST00000441074 ZBBXA8MT70 800 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 ARVCFO00192 962 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 TBX1O43435 398 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 XPNPEP2O43895 674 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 CCNKO75909 580 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 PRKD3O94806 890 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 CST1P01037 141 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 OR4Q2P0C623 313 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 JUNDP17535 347 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 FSHRP23945 695 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 MZF1P28698 734 aaPredicted RBP11.71□□□□□ -0.54
LTBR-203ENST00000441074 GRIK1P39086 918 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 MAP2K4P45985 399 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 KRT6CP48668 564 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 TRPC1P48995 793 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 IST1P53990 364 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 FADDQ13158 208 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 CLCA4Q14CN2 919 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 NPTX1Q15818 432 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 ZC3H12BQ5HYM0 836 aaKnown RBP11.71□□□□□ -0.54
LTBR-203ENST00000441074 LRRTM3Q86VH5 581 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 RAVER1Q8IY67 606 aaKnown RBP11.71□□□□□ -0.54
LTBR-203ENST00000441074 DPP10Q8N608 796 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 RTP3Q9BQQ7 232 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 TMLHEQ9NVH6 421 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 POLR3BQ9NW08 1133 aaPredicted RBP11.71□□□□□ -0.54
LTBR-203ENST00000441074 TMEM45AQ9NWC5 275 aa11.71□□□□□ -0.54
LTBR-203ENST00000441074 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms