RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PBXIP1Q96AQ6 731 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SLCO4A1Q96BD0 722 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 YIPF2Q9BWQ6 316 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 ANKRD60Q9BZ19 345 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 NOL11Q9H8H0 719 aaKnown RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 CCDC167Q9P0B6 97 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 TBC1D14Q9P2M4 693 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 COQ6Q9Y2Z9 468 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 PCDHB1Q9Y5F3 818 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 ATE1O95260 518 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 IDO1P14902 403 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 POLR2EP19388 210 aaKnown RBP13.93□□□□□ -0.18
LIMD1-202ENST00000440097 PSMA3P25788 255 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 HMOX2P30519 316 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 SPAM1P38567 509 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 NNMTP40261 264 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 PSME3P61289 254 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 TRIM25Q14258 630 aaKnown RBP13.93□□□□□ -0.18
LIMD1-202ENST00000440097 RBBP7Q16576 425 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 CARD16Q5EG05 197 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 HMBOX1Q6NT76 420 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 GK5Q6ZS86 529 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 CHST14Q8NCH0 376 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 MEAF6Q9HAF1 191 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 GNPTGQ9UJJ9 305 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 RWDD3Q9Y3V2 267 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 PTGDR2Q9Y5Y4 395 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 MYO15AQ9UKN7 3530 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 AZIN1O14977 448 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 ARHGEF15O94989 841 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 POP4O95707 220 aaKnown RBP13.93□□□□□ -0.18
LIMD1-202ENST00000440097 CKMT2P17540 419 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 CEBPBP17676 345 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 EPHA5P54756 1037 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 FOXA1P55317 472 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 RALGDSQ12967 914 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 KIF19Q2TAC6 998 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 CRTC1Q6UUV9 634 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 CYP2R1Q6VVX0 501 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 DCBLD1Q8N8Z6 715 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 HERVK_113Q902F9 699 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 THAP11Q96EK4 314 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 MAELQ96JY0 434 aaKnown RBP13.93□□□□□ -0.18
LIMD1-202ENST00000440097 ASB2Q96Q27 587 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 DUS2Q9NX74 493 aaKnown RBP13.93□□□□□ -0.18
LIMD1-202ENST00000440097 BTRCQ9Y297 605 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
LIMD1-202ENST00000440097 USP34Q70CQ2 3546 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 FUOMA2VDF0 154 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 E7ENX8 843 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 SLC25A14O95258 325 aaPredicted RBP13.92□□□□□ -0.18
LIMD1-202ENST00000440097 GUCA1CO95843 209 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 TSPAN12O95859 305 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 OCM2P0CE71 109 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 OCMP0CE72 109 aaPredicted RBP13.92□□□□□ -0.18
LIMD1-202ENST00000440097 CA5AP35218 305 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 RHDQ02161 417 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 LCP2Q13094 533 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 CAMK1Q14012 370 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 TMC5Q6UXY8 1006 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 ZNF786Q8N393 782 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 C12orf76Q8N812 135 aaPredicted RBP13.92□□□□□ -0.18
LIMD1-202ENST00000440097 GPR26Q8NDV2 337 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 PHOSPHO2Q8TCD6 241 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 TWIST2Q8WVJ9 160 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 BORCS5Q969J3 196 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 SCRN2Q96FV2 425 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 P2RY12Q9H244 342 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
LIMD1-202ENST00000440097 SUCOQ9UBS9 1254 aaKnown RBP13.92□□□□□ -0.18
LIMD1-202ENST00000440097 CD84Q9UIB8 345 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 DNAJC15Q9Y5T4 150 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 A0A087WXM4 84 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 FBP2O00757 339 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 CA3P07451 260 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 ADSLP30566 484 aaPredicted RBP13.92□□□□□ -0.18
LIMD1-202ENST00000440097 ACADVLP49748 655 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 CLCN7P51798 805 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 NME5P56597 212 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 STX1BP61266 288 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 AGKQ53H12 422 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 NHSL2Q5HYW2 709 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 OGFOD2Q6N063 350 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 DCDC5Q6ZRR9 648 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 ZBTB49Q6ZSB9 765 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 TPRG1Q6ZUI0 275 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 ADGRG2Q8IZP9 1017 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 TUBGCP3Q96CW5 907 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 ABHD8Q96I13 439 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 HGH1Q9BTY7 390 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 LATS2Q9NRM7 1088 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 CNOT6Q9ULM6 557 aaKnown RBP13.92□□□□□ -0.18
LIMD1-202ENST00000440097 TIMM22Q9Y584 194 aa13.92□□□□□ -0.18
LIMD1-202ENST00000440097 SOCS2O14508 198 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 GAPDHSO14556 408 aaPredicted RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 PIP5K1BO14986 540 aa13.91□□□□□ -0.18
LIMD1-202ENST00000440097 ZBTB11O95625 1053 aaPredicted RBP13.91□□□□□ -0.18
LIMD1-202ENST00000440097 S100BP04271 92 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms