RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 KLK10O43240 276 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 VAPBO95292 243 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 ANKRD34CP0C6C1 535 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 ARNTP27540 789 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 CD151P48509 253 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 TTPAP49638 278 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 KRT33BQ14525 404 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 ARMC3Q5W041 872 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 CASC4Q6P4E1 433 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 BMPERQ8N8U9 685 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 NAT8LQ8N9F0 302 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 SLCO2A1Q92959 643 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 ART4Q93070 314 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 PMEPA1Q969W9 287 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 CRELD1Q96HD1 420 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 SERPINB12Q96P63 405 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 RAB33BQ9H082 229 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 KCND1Q9NSA2 647 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 SLC39A1Q9NY26 324 aa23.06■■□□□ 1.28
VARS-217ENST00000440048 SDR42E2A6NKP2 422 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 B4E171 279 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 IFRD1O00458 451 aaPredicted RBP23.05■■□□□ 1.28
VARS-217ENST00000440048 NDUFS1P28331 727 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 TSPAN7P41732 249 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 PTGIRP43119 386 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 PTK6Q13882 451 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 BRD3Q15059 726 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 TMEM164Q5U3C3 297 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 IRGCQ6NXR0 463 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 KLHL35Q6PF15 583 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 NAPRTQ6XQN6 538 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 PPIL6Q8IXY8 311 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 C17orf53Q8N3J3 647 aaPredicted RBP23.05■■□□□ 1.28
VARS-217ENST00000440048 ZDHHC12Q96GR4 267 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 FERD3LQ96RJ6 166 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 PCDHGA3Q9Y5H0 932 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 SDK2Q58EX2 2172 aa23.05■■□□□ 1.28
VARS-217ENST00000440048 F8W8V4 182 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 KIF1CO43896 1103 aaKnown RBP23.04■■□□□ 1.28
VARS-217ENST00000440048 ITGB6P18564 788 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 PPP1CAP62136 330 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 MC2RQ01718 297 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 CLN3Q13286 438 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 BOP1Q14137 746 aaKnown RBP23.04■■□□□ 1.28
VARS-217ENST00000440048 RNASEH2BQ5TBB1 312 aaKnown RBP23.04■■□□□ 1.28
VARS-217ENST00000440048 KIAA0930Q6ICG6 404 aaPredicted RBP23.04■■□□□ 1.28
VARS-217ENST00000440048 FAM92BQ6ZTR7 304 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 PHC3Q8NDX5 983 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 TRIM56Q9BRZ2 755 aaKnown RBP23.04■■□□□ 1.28
VARS-217ENST00000440048 SAMD15Q9P1V8 674 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 ASIC3Q9UHC3 531 aa23.04■■□□□ 1.28
VARS-217ENST00000440048 SLC5A10A0PJK1 596 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 OR5K3A6NET4 321 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 GOLGA8KD6RF30 607 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 GOLGA8TH3BQL2 631 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 PRMT5O14744 637 aaPredicted RBP23.03■■□□□ 1.28
VARS-217ENST00000440048 TOX3O15405 576 aaPredicted RBP23.03■■□□□ 1.28
VARS-217ENST00000440048 RASSF9O75901 435 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 MAGEA3P43357 314 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 ARCN1P48444 511 aaKnown RBP23.03■■□□□ 1.28
VARS-217ENST00000440048 CACHD1Q5VU97 1274 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 PRSS42Q7Z5A4 293 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 ZFAND4Q86XD8 727 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 KLHL7Q8IXQ5 586 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 AGGF1Q8N302 714 aaeCLIP23.03■■□□□ 1.28
VARS-217ENST00000440048 OTUD6BQ8N6M0 293 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 ACVR1CQ8NER5 493 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 LKAAEAR1Q8TD35 194 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 TFGQ92734 400 aaPredicted RBP23.03■■□□□ 1.28
VARS-217ENST00000440048 FCRL3Q96P31 734 aaPredicted RBP23.03■■□□□ 1.28
VARS-217ENST00000440048 DDA1Q9BW61 102 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 CARD6Q9BX69 1037 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 MVB12BQ9H7P6 319 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 HRASLS2Q9NWW9 162 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.03■■□□□ 1.28
VARS-217ENST00000440048 SSUH2Q9Y2M2 353 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 B3GALT1Q9Y5Z6 326 aa23.03■■□□□ 1.28
VARS-217ENST00000440048 FAM237BA0A1B0GVD1 139 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 MAGEB16A2A368 324 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 IQCF5A8MTL0 148 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 DNALI1O14645 258 aaPredicted RBP23.02■■□□□ 1.28
VARS-217ENST00000440048 NDUFS3O75489 264 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 CD82P27701 267 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 CCR7P32248 378 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 PAFAH1B1P43034 410 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 SEPHS1P49903 392 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 RAB15P59190 212 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 TGIF1Q15583 401 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 ANKRD20A4Q4UJ75 823 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 SYTL3Q4VX76 610 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 BROXQ5VW32 411 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 ANKS6Q68DC2 871 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 MRNIPQ6NTE8 343 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 OOSP2Q86WS3 158 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 TSSK1BQ9BXA7 367 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 P2RY12Q9H244 342 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 ZNF768Q9H5H4 540 aaKnown RBP23.02■■□□□ 1.28
VARS-217ENST00000440048 FBXO8Q9NRD0 319 aa23.02■■□□□ 1.28
VARS-217ENST00000440048 SIDT1Q9NXL6 827 aaKnown RBP23.02■■□□□ 1.28
VARS-217ENST00000440048 MGAQ8IWI9 3026 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms