RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ROPN1LQ96C74 230 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 COQ10AQ96MF6 247 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 NTMT1Q9BV86 223 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 BRINP2Q9C0B6 783 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 TMEM245Q9H330 911 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 BCAP29Q9UHQ4 241 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 PPM1HQ9ULR3 514 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 PDE10AQ9Y233 779 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 NDUFAF1Q9Y375 327 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 LRRK1Q38SD2 2015 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 TRIM38O00635 465 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 WNT9AO14904 365 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 CFLARO15519 480 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 WDR47O94967 919 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ME2P23368 584 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 HMOX2P30519 316 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 RPIAP49247 311 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ELP6Q0PNE2 266 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 HSPA14Q0VDF9 509 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ACOX1Q15067 660 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 RPS6KA2Q15349 733 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 RAB30Q15771 203 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 POM121L1PQ3SYA9 428 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 VITQ6UXI7 678 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 SERPINA13PQ6UXR4 307 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 UBE2R2Q712K3 238 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ZNF765Q7L2R6 523 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 DET1Q7L5Y6 550 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 LRRC70Q7Z2Q7 622 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 MILR1Q7Z6M3 343 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 PCYOX1LQ8NBM8 494 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 PIP4K2CQ8TBX8 421 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ASB11Q8WXH4 323 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 GLYATL1Q969I3 302 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 PPP2R3CQ969Q6 453 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ATP6V1E2Q96A05 226 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ARRDC3Q96B67 414 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 DTD2Q96FN9 168 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 CDK15Q96Q40 435 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ACOX2Q99424 681 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 TRIM54Q9BYV2 358 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 PARVBQ9HBI1 364 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ZFP14Q9HCL3 533 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 NMRK1Q9NWW6 199 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 TRPS1Q9UHF7 1281 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 CDH7Q9ULB5 785 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 ANGPTL3Q9Y5C1 460 aa11.55□□□□□ -0.56
SMAD3-202ENST00000439724 DOCK8Q8NF50 2099 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 EPOPA6NHQ4 379 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 GFYI3L273 518 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 NR5A2O00482 541 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 AREL1O15033 823 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 NVLO15381 856 aaKnown RBP11.54□□□□□ -0.56
SMAD3-202ENST00000439724 MTX2O75431 263 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 STK16O75716 305 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SLCO2B1O94956 709 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 EBLN1P0CF75 366 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 HLA-EP13747 358 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 EPB42P16452 691 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 XRCC1P18887 633 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-202ENST00000439724 ARL1P40616 181 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-202ENST00000439724 OPRD1P41143 372 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 EIF2DP41214 584 aaKnown RBP11.54□□□□□ -0.56
SMAD3-202ENST00000439724 HTR6P50406 440 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 BOP1Q14137 746 aaKnown RBP11.54□□□□□ -0.56
SMAD3-202ENST00000439724 ZNF234Q14588 700 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 GRIN2CQ14957 1233 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 C6orf136Q5SQH8 315 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 TANGO2Q6ICL3 276 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 TLDC1Q6P9B6 456 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 BLOC1S3Q6QNY0 202 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SCIMPQ6UWF3 145 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 Q6ZSR9 355 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 KBTBD6Q86V97 674 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 VRK3Q8IV63 474 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SNX31Q8N9S9 440 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SLC26A7Q8TE54 656 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 UCMAQ8WVF2 138 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 ASZ1Q8WWH4 475 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 ELMO1Q92556 727 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 AP2M1Q96CW1 435 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 PPP1R16AQ96I34 528 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SLC29A3Q9BZD2 475 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SLC32A1Q9H598 525 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SPAG4Q9NPE6 437 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 HEBP1Q9NRV9 189 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 ARL15Q9NXU5 204 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 ZIM2Q9NZV7 527 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 SUCOQ9UBS9 1254 aaKnown RBP11.54□□□□□ -0.56
SMAD3-202ENST00000439724 MSRAQ9UJ68 235 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 CROTQ9UKG9 612 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 ITM2BQ9Y287 266 aa11.54□□□□□ -0.56
SMAD3-202ENST00000439724 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-202ENST00000439724 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-202ENST00000439724 E7ENX8 843 aa11.53□□□□□ -0.56
SMAD3-202ENST00000439724 KATNA1O75449 491 aa11.53□□□□□ -0.56
SMAD3-202ENST00000439724 BCAS2O75934 225 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-202ENST00000439724 CAPN3P20807 821 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms