RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 VMP1Q96GC9 406 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 C17orf62Q9BQA9 187 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 B3GNT4Q9C0J1 378 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 RAPGEFL1Q9UHV5 662 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 MRPS7Q9Y2R9 242 aaKnown RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 A0A087X1B8 175 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 RECQL5O94762 991 aaPredicted RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 TP53P04637 393 aaPredicted RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 IFNA16P05015 189 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 PRKCGP05129 697 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 HSMCR30P0CW71 290 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 SLC26A3P40879 764 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 EIF2DP41214 584 aaKnown RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 CDC20Q12834 499 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 FRG1Q14331 258 aaKnown RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 CENPLQ8N0S6 344 aaPredicted RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 PTGR2Q8N8N7 351 aaPredicted RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 OGDHLQ9ULD0 1010 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 VWA7Q9Y334 891 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 NDUFAF1Q9Y375 327 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 COL11A1P12107 1806 aaPredicted RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 ERVH48-1M5A8F1 160 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 FAM20BO75063 409 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 ANGPTL1O95841 491 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 ITGALP20701 1170 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 INPP1P49441 399 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 EFEMP1Q12805 493 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 ATP6AP1Q15904 470 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 ZBTB6Q15916 424 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 VPS26BQ4G0F5 336 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 EPHX4Q8IUS5 362 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 NTAN1Q96AB6 310 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 RANGRFQ9HD47 186 aaPredicted RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 CCNYL3P0C7X3 344 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SHMT2P34897 504 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SOX6P35712 828 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 AFF1P51825 1210 aaKnown RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 RAB14P61106 215 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 POU4F1Q01851 419 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 GALNT1Q10472 559 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 MADCAM1Q13477 382 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 ADPRMQ3LIE5 342 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 OVOS1Q6IE37 1185 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 TIGD7Q6NT04 549 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 DEDD2Q8WXF8 326 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 EMID1Q96A84 441 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 RPRD1AQ96P16 312 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 SEMA4BQ9NPR2 832 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 TRMT6Q9UJA5 497 aaKnown RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 NUP50Q9UKX7 468 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SNX6Q9UNH7 406 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SMIM35A0A1B0GVV1 85 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 AIREO43918 545 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 OXTRP30559 389 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 ESCO2Q56NI9 601 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 GLYATQ6IB77 296 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SLC45A3Q96JT2 553 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 GJD2Q9UKL4 321 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SDHDO14521 159 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 OR2B3O76000 313 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 RHOBTB1O94844 696 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 FTH1P02794 183 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 HLA-DQB2P05538 268 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 GPIP06744 558 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 GSTM1P09488 218 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 OR4Q2P0C623 313 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 DBPQ10586 325 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 RBBP7Q16576 425 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SLC22A9Q8IVM8 553 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 NCLNQ969V3 563 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 C11orf84Q9BUA3 381 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 PRKD2Q9BZL6 878 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 ELOVL6Q9H5J4 265 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 SPON1Q9HCB6 807 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 ST3GAL5Q9UNP4 418 aa15.56■□□□□ 0.08
DHFR-201ENST00000439211 PRG3Q9Y2Y8 225 aaPredicted RBP15.56■□□□□ 0.08
DHFR-201ENST00000439211 LINC00032P0C843 101 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 AGXTP21549 392 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 CRHBPP24387 322 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 DNAJB2P25686 324 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 AIF1P55008 147 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 MFSD4AQ8N468 514 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 DCBLD1Q8N8Z6 715 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 AKAP1Q92667 903 aaKnown RBP eCLIP15.55■□□□□ 0.088e-9■■■□□ 18.5
DHFR-201ENST00000439211 RPL3LQ92901 407 aaKnown RBP15.55■□□□□ 0.08
DHFR-201ENST00000439211 PHF21AQ96BD5 680 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 METTL2AQ96IZ6 378 aaKnown RBP15.55■□□□□ 0.08
DHFR-201ENST00000439211 KIFC1Q9BW19 673 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 KCNE2Q9Y6J6 123 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 A8MT66 165 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 ARPC2O15144 300 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 GPR32O75388 356 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 SIX3O95343 332 aaPredicted RBP15.55■□□□□ 0.08
DHFR-201ENST00000439211 HOXD10P28358 340 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 RENBPP51606 427 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 DAG1Q14118 895 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 HECTD2Q5U5R9 776 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 PAQR9Q6ZVX9 377 aa15.55■□□□□ 0.08
DHFR-201ENST00000439211 KDM1BQ8NB78 822 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms