RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 ZSCAN5AQ9BUG6 496 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 EFHD1Q9BUP0 239 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 SLC25A51Q9H1U9 297 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 ADNPQ9H2P0 1102 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 EPB41L1Q9H4G0 881 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 TRIM39Q9HCM9 518 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 APMAPQ9HDC9 416 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 FBXO8Q9NRD0 319 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 RAD18Q9NS91 495 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 ZDHHC18Q9NUE0 388 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 UBP1Q9NZI7 540 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 PILRAQ9UKJ1 303 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 RAB21Q9UL25 225 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 DNAJC16Q9Y2G8 782 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 ZNF711Q9Y462 761 aa9.04□□□□□ -0.96
AC011228.1-201ENST00000439027 LOC101059948A0A1B0GTJ6 334 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 A6NCN8 305 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 LILRA5A6NI73 299 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TERTO14746 1132 aaKnown RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 KMOO15229 486 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 PSMD3O43242 534 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 MTX2O75431 263 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 PMPCBO75439 489 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 ANXA9O76027 345 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 STK17BO94768 372 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 MT-CYBP00156 380 aaPredicted RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 FAM153BP0C7A2 387 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 ZNF7P17097 686 aaPredicted RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TPSB2P20231 275 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 ECHS1P30084 290 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 MAGEA6P43360 314 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 SEPHS1P49903 392 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 GEMP55040 296 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 GFERP55789 205 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 UBE2IP63279 158 aaKnown RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 CDK18Q07002 472 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 OLIG2Q13516 323 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TPSAB1Q15661 275 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 DEFB109BQ30KR1 87 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 FAM153CQ494X1 144 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TMEM26Q6ZUK4 368 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TIPARPQ7Z3E1 657 aaKnown RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TMC3Q7Z5M5 1100 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 ADGRG6Q86SQ4 1221 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 LRRTM4Q86VH4 590 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 HOOK3Q86VS8 718 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 CCDC25Q86WR0 208 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TRAM1L1Q8N609 369 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 EIF1ADQ8N9N8 165 aaKnown RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 GDAP1Q8TB36 358 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 GLYATL1Q969I3 302 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 EID2BQ96D98 161 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 SLC45A3Q96JT2 553 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 PWWP2AQ96N64 755 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 CATSPER2Q96P56 530 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TGM7Q96PF1 710 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 PPP1R2P1Q96PQ5 205 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 FAM129AQ9BZQ8 928 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 TRIT1Q9H3H1 467 aaKnown RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 MAGEE1Q9HCI5 957 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 BPIFA1Q9NP55 256 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 SLC23A2Q9UGH3 650 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 FAM153AQ9UHL3 310 aa9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 AAR2Q9Y312 384 aaKnown RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 SPTAN1Q13813 2472 aaKnown RBP9.03□□□□□ -0.96
AC011228.1-201ENST00000439027 PRRC2CQ9Y520 2896 aaKnown RBP9.02□□□□□ -0.96
AC011228.1-201ENST00000439027 ERI2A8K979 691 aaKnown RBP9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 RASSF9O75901 435 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 TMEM63AO94886 807 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 UBXN7O94888 489 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 CDK14O94921 469 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 AP2A1O95782 977 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 NDST3O95803 873 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 AGTP01019 485 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 BPIP17213 487 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 XRCC1P18887 633 aaPredicted RBP9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 TCN2P20062 427 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 IDSP22304 550 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 RPL10P27635 214 aaKnown RBP9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 GRIA1P42261 906 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 TNNT3P45378 269 aaPredicted RBP9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 CLCNKAP51800 687 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 WNT3AP56704 352 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 DCDC1P59894 354 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 SARNPP82979 210 aaKnown RBP9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 CDK16Q00536 496 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 MC1RQ01726 317 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 TLE1Q04724 770 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 ABHD18Q0P651 414 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 GTF2H3Q13889 308 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 BRD3Q15059 726 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 SKIDA1Q1XH10 827 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 KCTD11Q693B1 232 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 PDPK2PQ6A1A2 396 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 KDELC1Q6UW63 502 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 ESX1Q8N693 406 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 MCUQ8NE86 351 aa9.02□□□□□ -0.97
AC011228.1-201ENST00000439027 IPMKQ8NFU5 416 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms