RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 CPSF2Q9P2I0 782 aaKnown RBP7.53□□□□□ -1.2
HMGB2-202ENST00000438704 VTI1BQ9UEU0 232 aa7.53□□□□□ -1.2
HMGB2-202ENST00000438704 CRLS1Q9UJA2 301 aa7.53□□□□□ -1.2
HMGB2-202ENST00000438704 SARDHQ9UL12 918 aa7.53□□□□□ -1.2
HMGB2-202ENST00000438704 TMPRSS11EQ9UL52 423 aa7.53□□□□□ -1.2
HMGB2-202ENST00000438704 SLC12A4Q9UP95 1085 aa7.53□□□□□ -1.2
HMGB2-202ENST00000438704 NUMBLQ9Y6R0 609 aa7.53□□□□□ -1.2
HMGB2-202ENST00000438704 PIKFYVEQ9Y2I7 2098 aa7.53□□□□□ -1.2
HMGB2-202ENST00000438704 PLXNB3Q9ULL4 1909 aa7.52□□□□□ -1.2
HMGB2-202ENST00000438704 A0A0U1RQS6 177 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 A6NHS1 94 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 K7EQS6 105 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 MATN2O00339 956 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 WNT9AO14904 365 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 KPNA5O15131 536 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ITM2AO43736 263 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 NUAK1O60285 661 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 HNRNPCL1O60812 293 aaKnown RBP7.52□□□□□ -1.21
HMGB2-202ENST00000438704 SMIM24O75264 130 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 NIPSNAP2O75323 286 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 TNFRSF21O75509 655 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ATP5HO75947 161 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 KIAA0754O94854 1291 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 SLC4A1P02730 911 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ADRB3P13945 408 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 C5AR1P21730 350 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 XPAP23025 273 aaPredicted RBP7.52□□□□□ -1.21
HMGB2-202ENST00000438704 DGKAP23743 735 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 CA5AP35218 305 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 GLRBP48167 497 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 KCNC1P48547 511 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 RGS4P49798 205 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 GALK1P51570 392 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 PGGT1BP53609 377 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 NAGLUP54802 743 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 CORO7P57737 925 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 IRX4P78413 519 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 B4GALNT1Q00973 533 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 KRT72Q14CN4 511 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 TTLL9Q3SXZ7 439 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ATP13A5Q4VNC0 1218 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 TMEM196Q5HYL7 178 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 SH2D4BQ5SQS7 431 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 LDLRAP1Q5SW96 308 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 METTL21CQ5VZV1 264 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 EGFLAMQ63HQ2 1017 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 NAIF1Q69YI7 327 aaPredicted RBP7.52□□□□□ -1.21
HMGB2-202ENST00000438704 PAOXQ6QHF9 649 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ZCCHC23Q6ZST2 131 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 FRMD7Q6ZUT3 714 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ADAMTSL2Q86TH1 951 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 LSMEM2Q8N112 164 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 FITM2Q8N6M3 262 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 PAF1Q8N7H5 531 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 PNPLA1Q8N8W4 532 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 RFWD2Q8NHY2 731 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 BTN2A2Q8WVV5 523 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 LRRC37BQ96QE4 947 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 TUBB6Q9BUF5 446 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 TMEM120AQ9BXJ8 343 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 FAM126AQ9BYI3 521 aaPredicted RBP7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ABCG8Q9H221 673 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 MTG2Q9H4K7 406 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ALG9Q9H6U8 611 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 RDH14Q9HBH5 336 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 EML4Q9HC35 981 aaKnown RBP7.52□□□□□ -1.21
HMGB2-202ENST00000438704 CD248Q9HCU0 757 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 ABCF3Q9NUQ8 709 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 APOBEC2Q9Y235 224 aaKnown RBP7.52□□□□□ -1.21
HMGB2-202ENST00000438704 DNAJC16Q9Y2G8 782 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 STON1Q9Y6Q2 735 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
HMGB2-202ENST00000438704 E5RI56 91 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 SPECC1L-ADORA2AF8WAN1 911 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 KPNA3O00505 521 aaPredicted RBP7.51□□□□□ -1.21
HMGB2-202ENST00000438704 EREGO14944 169 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 SLC22A2O15244 555 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 SLC16A5O15375 505 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 HDAC3O15379 428 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 GPR39O43194 453 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 TSPAN6O43657 245 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 SGTAO43765 313 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 CCDC22O60826 627 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 LYPLA1O75608 230 aaPredicted RBP7.51□□□□□ -1.21
HMGB2-202ENST00000438704 FSBPO95073 299 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 HSPA4LO95757 839 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 SOD1P00441 154 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 SERPINA6P08185 405 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 FGF4P08620 206 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 RPS17P08708 135 aaKnown RBP7.51□□□□□ -1.21
HMGB2-202ENST00000438704 OR56A5P0C7T3 313 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 ELFN1P0C7U0 828 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 MPC1LP0DKB6 136 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 ESRRAP11474 423 aaPredicted RBP7.51□□□□□ -1.21
HMGB2-202ENST00000438704 HLA-EP13747 358 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 ATP1B2P14415 290 aaPredicted RBP7.51□□□□□ -1.21
HMGB2-202ENST00000438704 UGT1A6P19224 532 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 CHRM3P20309 590 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 DRD1P21728 446 aa7.51□□□□□ -1.21
HMGB2-202ENST00000438704 UGT1A1P22309 533 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms