RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ARMC6Q6NXE6 501 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 ABRAXAS1Q6UWZ7 409 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 FAM183BPQ6ZVS7 135 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 SHISA5Q8N114 240 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 LGI4Q8N135 537 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 PDILTQ8N807 584 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 C8orf44Q96CB5 159 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 YIPF4Q9BSR8 244 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 BEX2Q9BXY8 128 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 KLHL25Q9H0H3 589 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 CATSPERBQ9H7T0 1116 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 TXLNGQ9NUQ3 528 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 Q9UFV3 132 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 NEU3Q9UQ49 428 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 ADGRG1Q9Y653 693 aa10.65□□□□□ -0.7
RTN4-211ENST00000438462 NSG1A0A0A6YYJ2 146 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 OR2B3O76000 313 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 WFS1O76024 890 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 SOX30O94993 753 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 GOSR1O95249 250 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 CYP2A6P11509 494 aaPredicted RBP10.64□□□□□ -0.71
RTN4-211ENST00000438462 ST6GAL1P15907 406 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 ZNF8P17098 575 aaPredicted RBP10.64□□□□□ -0.71
RTN4-211ENST00000438462 NSG1P42857 185 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 LRMPQ12912 555 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 NKG7Q16617 165 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 TFDP3Q5H9I0 405 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 RNFT1Q5M7Z0 435 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 PRR31Q5SQ13 230 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 MANEALQ5VSG8 457 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 CDHR3Q6ZTQ4 885 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 PPP1R14CQ8TAE6 165 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 FKBP10Q96AY3 582 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 PGAP3Q96FM1 320 aaPredicted RBP10.64□□□□□ -0.71
RTN4-211ENST00000438462 CLIC6Q96NY7 704 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 RIOK2Q9BVS4 552 aaKnown RBP10.64□□□□□ -0.71
RTN4-211ENST00000438462 GSX2Q9BZM3 304 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 TRIM7Q9C029 511 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 ATG10Q9H0Y0 220 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 CARD9Q9H257 536 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 KCTD10Q9H3F6 313 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 WDR54Q9H977 334 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 SP110Q9HB58 689 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 CNOT6Q9ULM6 557 aaKnown RBP10.64□□□□□ -0.71
RTN4-211ENST00000438462 WDR37Q9Y2I8 494 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 AP1M2Q9Y6Q5 423 aa10.64□□□□□ -0.71
RTN4-211ENST00000438462 GSAPA4D1B5 854 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 CPP00450 1065 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 CYP1A1P04798 512 aaPredicted RBP10.63□□□□□ -0.71
RTN4-211ENST00000438462 SERPINA7P05543 415 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 TMPRSS15P98073 1019 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 HYAL4Q2M3T9 481 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 DEFB110Q30KQ9 67 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 EMC4Q5J8M3 183 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 OLFML1Q6UWY5 402 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 UNC13DQ70J99 1090 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.63□□□□□ -0.71
RTN4-211ENST00000438462 FAM98AQ8NCA5 519 aaKnown RBP10.63□□□□□ -0.71
RTN4-211ENST00000438462 TSEN2Q8NCE0 465 aaKnown RBP10.63□□□□□ -0.71
RTN4-211ENST00000438462 MDS2Q8NDY4 140 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 SCMH1Q96GD3 660 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 TBCBQ99426 244 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 LRRC27Q9C0I9 530 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 L2HGDHQ9H9P8 463 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 ATXN10Q9UBB4 475 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 POMT2Q9UKY4 750 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 ALG6Q9Y672 507 aa10.63□□□□□ -0.71
RTN4-211ENST00000438462 OR6C74A6NCV1 312 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 TUBAL3A6NHL2 446 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 H3BMH7 237 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 SYT5O00445 386 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 RASGRF2O14827 1237 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 CDC40O60508 579 aaKnown RBP eCLIP10.62□□□□□ -0.71
RTN4-211ENST00000438462 ITGAMP11215 1152 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 COX6A1P12074 109 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 ITGAXP20702 1163 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 TBXAS1P24557 533 aaPredicted RBP10.62□□□□□ -0.71
RTN4-211ENST00000438462 SOX5P35711 763 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 CSNK1DP48730 415 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 FKBP15Q5T1M5 1219 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 ZNF648Q5T619 568 aaPredicted RBP10.62□□□□□ -0.71
RTN4-211ENST00000438462 LIPNQ5VXI9 398 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 CNSTQ6PJW8 725 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 GALNTL5Q7Z4T8 443 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 ZNF655Q8N720 491 aaPredicted RBP10.62□□□□□ -0.71
RTN4-211ENST00000438462 N4BP2L2Q92802 583 aaPredicted RBP10.62□□□□□ -0.71
RTN4-211ENST00000438462 SLCO2A1Q92959 643 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 SH3GL2Q99962 352 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 PDFQ9HBH1 243 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 ARFGAP3Q9NP61 516 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 KBTBD4Q9NVX7 518 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 FANCLQ9NW38 375 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 CTSFQ9UBX1 484 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
RTN4-211ENST00000438462 STAP1Q9ULZ2 295 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 NPFFR2Q9Y5X5 522 aa10.62□□□□□ -0.71
RTN4-211ENST00000438462 FADS2P1A8MWK0 482 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 ZSCAN9O15535 394 aaPredicted RBP10.61□□□□□ -0.71
RTN4-211ENST00000438462 CTSBP07858 339 aa10.61□□□□□ -0.71
RTN4-211ENST00000438462 PRKCSHP14314 528 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms