RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 PRUNE1Q86TP1 453 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 D2HGDHQ8N465 521 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 SIDT2Q8NBJ9 832 aaKnown RBP17.41■□□□□ 0.38
CPNE1-213ENST00000434795 PHC3Q8NDX5 983 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 FERD3LQ96RJ6 166 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 COG4Q9H9E3 785 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 PDE7BQ9NP56 450 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 PADI1Q9ULC6 663 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 ZNF148Q9UQR1 794 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 HEBP2Q9Y5Z4 205 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 PRSS21Q9Y6M0 314 aa17.41■□□□□ 0.38
CPNE1-213ENST00000434795 UBA6A0AVT1 1052 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-213ENST00000434795 CCDC162PA2VCL2 907 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 TLCD2A6NGC4 264 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 AP2A2O94973 939 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 TIAF1O95411 115 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 FDFT1P37268 417 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 KPNA2P52292 529 aaKnown RBP17.4■□□□□ 0.38
CPNE1-213ENST00000434795 GSDMDP57764 484 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 ACY1Q03154 408 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 CDH17Q12864 832 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 RPA4Q13156 261 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 KRT33BQ14525 404 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 RPS6KA1Q15418 735 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 CCDC38Q502W7 563 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 SEL1L2Q5TEA6 688 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 PWWP2BQ6NUJ5 590 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 OOSP2Q86WS3 158 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 ACVR1CQ8NER5 493 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 PPM1MQ96MI6 270 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 ALS2CR12Q96Q35 445 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 NRTNQ99748 197 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 ADNPQ9H2P0 1102 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 TFB2MQ9H5Q4 396 aaKnown RBP17.4■□□□□ 0.38
CPNE1-213ENST00000434795 AKIRIN1Q9H9L7 192 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-213ENST00000434795 SMARCAL1Q9NZC9 954 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 RARRES3Q9UL19 164 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 MRPS18BQ9Y676 258 aaKnown RBP17.4■□□□□ 0.38
CPNE1-213ENST00000434795 SPTA1P02549 2419 aa17.4■□□□□ 0.38
CPNE1-213ENST00000434795 CCDC78A2IDD5 438 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 OR51F1A6NGY5 319 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 ZBTB11O95625 1053 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-213ENST00000434795 IFNB1P01574 187 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 GSTM1P09488 218 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 CCNYL3P0C7X3 344 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 EBLN1P0CF75 366 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 PRKAR1AP10644 381 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 POLR2CP19387 275 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-213ENST00000434795 OAS2P29728 719 aaKnown RBP17.39■□□□□ 0.37
CPNE1-213ENST00000434795 DLSTP36957 453 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 CCR10P46092 362 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 ARCN1P48444 511 aaKnown RBP17.39■□□□□ 0.37
CPNE1-213ENST00000434795 MC1RQ01726 317 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 GSTM4Q03013 218 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 TUBB3Q13509 450 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 SNX1Q13596 522 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 SIX1Q15475 284 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-213ENST00000434795 ARMC6Q6NXE6 501 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 FBXO38Q6PIJ6 1188 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 CARFQ8N187 725 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 DNAAF3Q8N9W5 541 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 GLIS1Q8NBF1 620 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 OR13J1Q8NGT2 312 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 LCN9Q8WX39 176 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 SLC25A18Q9H1K4 315 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 FGF21Q9NSA1 209 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 SLC2A6Q9UGQ3 507 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 CROTQ9UKG9 612 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 RIMKLBQ9ULI2 386 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 DRG1Q9Y295 367 aaKnown RBP17.39■□□□□ 0.37
CPNE1-213ENST00000434795 BSNQ9UPA5 3926 aa17.39■□□□□ 0.37
CPNE1-213ENST00000434795 GOLGA6L6A8MZA4 724 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 BTN3A3O00478 584 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 ZIC2O95409 532 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-213ENST00000434795 TCN2P20062 427 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 ADRA1DP25100 572 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 MSNP26038 577 aaKnown RBP17.38■□□□□ 0.37
CPNE1-213ENST00000434795 FOXN2P32314 431 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 NSG1P42857 185 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 ARL4DP49703 201 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 POLE2P56282 527 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 CDC20Q12834 499 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 SEMA5AQ13591 1074 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 ITIH4Q14624 930 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 CCNG2Q16589 344 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 CYB5D1Q6P9G0 228 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 STARD8Q92502 1023 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 TFGQ92734 400 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-213ENST00000434795 HDAC10Q969S8 669 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 STAMBPL1Q96FJ0 436 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 ZNF778Q96MU6 729 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 RANBP9Q96S59 729 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 FAM117AQ9C073 453 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 SRMSQ9H3Y6 488 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 MVB12BQ9H7P6 319 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 VPS37BQ9H9H4 285 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 LHX9Q9NQ69 397 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 CASS4Q9NQ75 786 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms