RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 APOL4Q9BPW4 351 aa7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 TSEN34Q9BSV6 310 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 TRMOQ9BU70 441 aa7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 HMX1Q9NP08 348 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 FAM50BQ9Y247 325 aa7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 PCDHB5Q9Y5E4 795 aa7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 N6AMT1Q9Y5N5 214 aa7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 DNAJC15Q9Y5T4 150 aa7.31□□□□□ -1.24
SYNPO2-203ENST00000434046 A0A1W2PP18 115 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SLC12A8A0AV02 714 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 YJEFN3A6XGL0 299 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 TEX28O15482 410 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 CA12O43570 354 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 BNIP3LO60238 219 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 MITFO75030 526 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 KATNA1O75449 491 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 CNTN5O94779 1100 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 DNTTP04053 509 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 LCKP06239 509 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 KCNE1P15382 129 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SPNP16150 400 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 WARSP23381 471 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 GEMP55040 296 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 FOXA1P55317 472 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 IFITM2Q01629 132 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 PRKCZQ05513 592 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 FCHO2Q0JRZ9 810 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 CLCA4Q14CN2 919 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 ZNF789Q5FWF6 425 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 TECRLQ5HYJ1 363 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 ANKS6Q68DC2 871 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 LARP4Q71RC2 724 aaKnown RBP eCLIP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 DET1Q7L5Y6 550 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 RAB43Q86YS6 212 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 DACT3Q96B18 629 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 RMDN1Q96DB5 314 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 AURKBQ96GD4 344 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 EMILIN2Q9BXX0 1053 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 LRRC3Q9BY71 257 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 ZBTB20Q9HC78 741 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 CCDC177Q9NQR7 707 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 GTF2IRD1Q9UHL9 959 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 Q9Y3F1 56 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 LOXHD1Q8IVV2 1947 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 POLR2AP24928 1970 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SSC5DA1L4H1 1573 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 FAM72CH0Y354 149 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 HOXC11O43248 304 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 GPR32O75388 356 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 IMPDH1P20839 514 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 GGT5P36269 586 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 INPP1P49441 399 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 YBX1P67809 324 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SH3BP2P78314 561 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 NOGQ13253 232 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 DDR2Q16832 855 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 MARCH8Q5T0T0 291 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 FAM72AQ5TYM5 149 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SDHAF4Q5VUM1 108 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SYPL2Q5VXT5 272 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 GTF2IRD2BQ6EKJ0 949 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 GDF6Q6KF10 455 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 FAM72DQ6L9T8 149 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 GTF2IRD2Q86UP8 949 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 OSTM1Q86WC4 334 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 FAM72BQ86X60 149 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 RASAL3Q86YV0 1011 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 PIK3C3Q8NEB9 887 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 DUS3LQ96G46 650 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 YME1L1Q96TA2 773 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 MUC13Q9H3R2 512 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 FBXO44Q9H4M3 255 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SP140LQ9H930 580 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 NECTIN3Q9NQS3 549 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 ABCC13Q9NSE7 274 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 ERVK13-1Q9NX77 482 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 CD274Q9NZQ7 290 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 DNAJB9Q9UBS3 223 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 POLG2Q9UHN1 485 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 RAPGEFL1Q9UHV5 662 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SNX6Q9UNH7 406 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 ISPDA4D126 451 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 OR51F1A6NGY5 319 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 C12orf71A8MTZ7 269 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 MEN1O00255 615 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 PIRO00625 290 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 PRMT5O14744 637 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 TULP3O75386 442 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 RHOBTB1O94844 696 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 ALPLP05186 524 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 OR4Q2P0C623 313 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 HTR2BP41595 481 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 PSMD8P48556 350 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 TBX4P57082 545 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 EEFSECP57772 596 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 DAOAP59103 153 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 KCNC4Q03721 635 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 SOX4Q06945 474 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 RAPSNQ13702 412 aa7.3□□□□□ -1.24
SYNPO2-203ENST00000434046 CTF1Q16619 201 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms