RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 VPS13AQ96RL7 3174 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CEP250Q9BV73 2442 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 PIKFYVEQ9Y2I7 2098 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 PIEZO1Q92508 2521 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 IGHV5-10-1A0A0J9YXX1 117 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 A0A1W2PNU3 283 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 UBA6A0AVT1 1052 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 MAGEB16A2A368 324 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 EFCAB8A8MWE9 144 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 D6RAR5 112 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 DNALI1O14645 258 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 BRINP1O60477 761 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 NDUFS3O75489 264 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 TCEA3O75764 348 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 URI1O94763 535 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 TNFSF15O95150 251 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CAPNS1P04632 268 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR56A5P0C7T3 313 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ITIH1P19827 911 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 IVDP26440 423 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 RBMS1P29558 406 aaKnown RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 FMO4P31512 558 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 NSG1P42857 185 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPR3P46089 330 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 FASLGP48023 281 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SEPHS1P49903 392 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 PDX1P52945 283 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 LIMK2P53671 638 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ITGA8P53708 1063 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 EIF3BP55884 814 aaKnown RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CDK16Q00536 496 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ACVR1Q04771 509 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ABRQ12979 859 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRKG2Q13237 762 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CTBP1Q13363 440 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 BOP1Q14137 746 aaKnown RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPR18Q14330 331 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 C16orf72Q14CZ0 275 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 C11orf91Q3C1V1 193 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 BBS9Q3SYG4 887 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF789Q5FWF6 425 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 RNASEH2BQ5TBB1 312 aaKnown RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 LYPLAL1Q5VWZ2 237 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 PTRHD1Q6GMV3 140 aaKnown RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMEM71Q6P5X7 295 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF449Q6P9G9 518 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 C19orf48Q6RUI8 117 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 AFTPHQ6ULP2 937 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CERS6Q6ZMG9 384 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 FAM92BQ6ZTR7 304 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMEM26Q6ZUK4 368 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 RAB11FIP2Q7L804 512 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF438Q7Z4V0 828 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SDCCAG8Q86SQ7 713 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 JAMLQ86YT9 394 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 UNC5BQ8IZJ1 945 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF295-AS1Q8N0V1 137 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 AGGF1Q8N302 714 aaeCLIP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 FBXO39Q8N4B4 442 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 MCUQ8NE86 351 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SPATA4Q8NEY3 305 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR4E2Q8NGC2 313 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CFAP61Q8NHU2 1237 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 WDR36Q8NI36 951 aaKnown RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 WDR48Q8TAF3 677 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 FAM136AQ96C01 138 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 NXPE2Q96DL1 559 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 STAMBPL1Q96FJ0 436 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRR11Q96HE9 360 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SIGLEC10Q96LC7 697 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCDC74BQ96LY2 380 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 C12orf66Q96MD2 445 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMEM74Q96NL1 305 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SERPINB12Q96P63 405 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 NRTNQ99748 197 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 C19orf43Q9BQ61 176 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 KIFC1Q9BW19 673 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 STRADBQ9C0K7 418 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 NRSN2Q9GZP1 204 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 POLR1BQ9H9Y6 1135 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC40A1Q9NP59 571 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SARS2Q9NP81 518 aaKnown RBP5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 TREX1Q9NSU2 369 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 SAMD15Q9P1V8 674 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 PISDQ9UG56 409 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 ACSL5Q9ULC5 683 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 RIMKLBQ9ULI2 386 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 RAXQ9Y2V3 346 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 RPS6KL1Q9Y6S9 549 aa5.64□□□□□ -1.51
HMGB3P24-201ENST00000433260 IGLV3-16A0A075B6K0 115 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCDC187A0A096LP49 1063 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 C17orf113A0A1B0GUU1 675 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRR19A6NJB7 356 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 SRRM3A6NNA2 597 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMX2-CTNND1H3BSU7 103 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 IFRD1O00458 451 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 TLX3O43711 291 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 KIF1CO43896 1103 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms