RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SLC22A16Q86VW1 577 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 C9orf43Q8TAL5 461 aaPredicted RBP16.25■□□□□ 0.19
RIF1-204ENST00000430328 MIR1-1HGQ9H1L0 117 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 SEC14L4Q9UDX3 406 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 OR12D3Q9UGF7 316 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 SCAMP1O15126 338 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 PRKACAP17612 351 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 BORAQ6PGQ7 559 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 TOR1AIP2Q8NFQ8 470 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 OR56B2PQ8NGI1 322 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 OR4L1Q8NH43 312 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 C7orf50Q9BRJ6 194 aaKnown RBP16.25■□□□□ 0.19
RIF1-204ENST00000430328 WASF2Q9Y6W5 498 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 PTPRKQ15262 1439 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 CRTC1Q6UUV9 634 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 DNAJC28Q9NX36 388 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 METP08581 1390 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 CACNB4O00305 520 aaPredicted RBP16.25■□□□□ 0.19
RIF1-204ENST00000430328 UBXN7O94888 489 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
RIF1-204ENST00000430328 CLCN3P51790 818 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 BTBD16Q32M84 506 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 FBXO43Q4G163 708 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 PTF1AQ7RTS3 328 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 ZDHHC15Q96MV8 337 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 PCDHB18PQ96TA0 734 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
RIF1-204ENST00000430328 GADD45GO95257 159 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 FASTKD3Q14CZ7 662 aaKnown RBP16.25■□□□□ 0.19
RIF1-204ENST00000430328 SV2AQ7L0J3 742 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 SLC9B2Q86UD5 537 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 EGFL6Q8IUX8 553 aa16.25■□□□□ 0.19
RIF1-204ENST00000430328 BCKDHAP12694 445 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 POU2F1P14859 743 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 POLR2HP52434 150 aaKnown RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 POM121L1PQ3SYA9 428 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 PHYKPLQ8IUZ5 450 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 PHC3Q8NDX5 983 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 TSSK3Q96PN8 268 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 LCHNA4D1U4 455 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ZNF726A6NNF4 738 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 SMAD9O15198 467 aaKnown RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 PAEPP09466 180 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 RYKP34925 604 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 CDH12P55289 794 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 BNIP1Q12981 228 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 MOGSQ13724 837 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 TRAV19A0A0A6YYK7 116 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 CXCL8P10145 99 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 DSG2Q14126 1118 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 SEC23BQ15437 767 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 SNAP47Q5SQN1 464 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 DNM1P34Q6PK57 102 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ZNF773Q6PK81 442 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 C16orf86Q6ZW13 317 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 SPIN1Q9Y657 262 aaPredicted RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 ELOA3DA6NLF2 546 aaPredicted RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 GTF2F2P13984 249 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 CAPZA1P52907 286 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 TARDBPQ13148 414 aaKnown RBP eCLIP16.24■□□□□ 0.192e-6■■□□□ 12
RIF1-204ENST00000430328 ELOA3BQ3SY89 546 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ADGRD2Q7Z7M1 963 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 DEFB106AQ8N104 65 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 CENPSQ8N2Z9 138 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 TSEN2Q8NCE0 465 aaKnown RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 ARRDC4Q8NCT1 418 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ELOA3Q8NG57 546 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ITFG2Q969R8 447 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 PLEKHA3Q9HB20 300 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 COLEC10Q9Y6Z7 277 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 FGL1Q08830 312 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 HID1Q8IV36 788 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ZMIZ2Q8NF64 920 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 MTMR8Q96EF0 704 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 DENND2DQ9H6A0 471 aaPredicted RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 TESMINQ9Y4I5 508 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 FBP2O00757 339 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ALAS2P22557 587 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 UGT2B10P36537 528 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 RPL35P42766 123 aaKnown RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 FCGRTP55899 365 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 STYK1Q6J9G0 422 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 CUZD1Q86UP6 607 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 JAGN1Q8N5M9 183 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 DPF1Q92782 380 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 WACQ9BTA9 647 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ATP7BP35670 1465 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 PCSK2P16519 638 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 RPS3P23396 243 aaKnown RBP eCLIP16.24■□□□□ 0.19
RIF1-204ENST00000430328 PRPF38BQ5VTL8 546 aaKnown RBP16.24■□□□□ 0.19
RIF1-204ENST00000430328 CNTD1Q8N815 330 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 ELOVL2Q9NXB9 296 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 PCYOX1Q9UHG3 505 aa16.24■□□□□ 0.19
RIF1-204ENST00000430328 WDPCPO95876 746 aa16.23■□□□□ 0.19
RIF1-204ENST00000430328 CYP3A4P08684 503 aa16.23■□□□□ 0.19
RIF1-204ENST00000430328 ALDH3B1P43353 468 aa16.23■□□□□ 0.19
RIF1-204ENST00000430328 RAB27AP51159 221 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms