RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TMEM126BQ8IUX1 230 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 D2HGDHQ8N465 521 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 LRRC57Q8N9N7 239 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 OR4E2Q8NGC2 313 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 MRFAP1L1Q96HT8 127 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 CALR3Q96L12 384 aaKnown RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 LINC00615Q96LM1 132 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 TLR10Q9BXR5 811 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 AKIRIN1Q9H9L7 192 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 PIH1D1Q9NWS0 290 aaKnown RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 PACSIN2Q9UNF0 486 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-209ENST00000428728 MAN2B2Q9Y2E5 1009 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 COLEC10Q9Y6Z7 277 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 FER1L5A0AVI2 2057 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 MED13Q9UHV7 2174 aa16.64■□□□□ 0.25
TRIM39-209ENST00000428728 CCDC88CQ9P219 2028 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 GSAPA4D1B5 854 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 AGAP14A8MT82 685 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 BTNL10A8MVZ5 291 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 MKRN2OSH3BPM6 223 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 LDB2O43679 373 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 CPNE3O75131 537 aaKnown RBP16.63■□□□□ 0.25
TRIM39-209ENST00000428728 ATP1B2P14415 290 aaPredicted RBP16.63■□□□□ 0.25
TRIM39-209ENST00000428728 NDUFS1P28331 727 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 CASRP41180 1078 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 CDKN1CP49918 316 aaPredicted RBP16.63■□□□□ 0.25
TRIM39-209ENST00000428728 TUBB4BP68371 445 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 PRKAA1Q13131 559 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 TUBB2AQ13885 445 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 CAPRIN2Q6IMN6 1127 aaKnown RBP16.63■□□□□ 0.25
TRIM39-209ENST00000428728 PEX26Q7Z412 305 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 TAB3Q8N5C8 712 aaPredicted RBP16.63■□□□□ 0.25
TRIM39-209ENST00000428728 FAM71DQ8N9W8 422 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 CCM2Q9BSQ5 444 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 TUBB2BQ9BVA1 445 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 COG4Q9H9E3 785 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 ARNT2Q9HBZ2 717 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 ZDHHC3Q9NYG2 299 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 AMFRQ9UKV5 643 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 PCDHGA6Q9Y5G7 932 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 HEBP2Q9Y5Z4 205 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 DOPEY2Q9Y3R5 2298 aa16.63■□□□□ 0.25
TRIM39-209ENST00000428728 CCDC78A2IDD5 438 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 GOLGA6L9A6NEM1 432 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 C21orf140B9A014 251 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 K7EM74 188 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 RFPL1O75677 317 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 SCRG1O75711 98 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 FTCDO95954 541 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 TPH1P17752 444 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 CDH3P22223 829 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 POU6F1Q14863 301 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 TMTC4Q5T4D3 741 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 TAS2R42Q7RTR8 314 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 SERPINA9Q86WD7 417 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 ACVR1CQ8NER5 493 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 ZFPM2Q8WW38 1151 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 LCN9Q8WX39 176 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 MR1Q95460 341 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 ZNF501Q96CX3 271 aaPredicted RBP16.62■□□□□ 0.25
TRIM39-209ENST00000428728 FCRL4Q96PJ5 515 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 FERD3LQ96RJ6 166 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 NRTNQ99748 197 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 HGH1Q9BTY7 390 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 RBSNQ9H1K0 784 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 SRMSQ9H3Y6 488 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 FEZ2Q9UHY8 353 aaPredicted RBP16.62■□□□□ 0.25
TRIM39-209ENST00000428728 POMT2Q9UKY4 750 aa16.62■□□□□ 0.25
TRIM39-209ENST00000428728 IGLV3-16A0A075B6K0 115 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 SLC9B1P1A6NJY1 282 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 IFRD1O00458 451 aaPredicted RBP16.61■□□□□ 0.25
TRIM39-209ENST00000428728 DNAJB5O75953 348 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 METTL18O95568 372 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 ACRV1P26436 265 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 PREPP48147 710 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 PMS2P54278 862 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 GDF10P55107 478 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 GPS2Q13227 327 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 IGFBP7Q16270 282 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 GPR33Q49SQ1 333 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 KCTD11Q693B1 232 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 BPHLQ86WA6 291 aaPredicted RBP16.61■□□□□ 0.25
TRIM39-209ENST00000428728 KLHDC8BQ8IXV7 354 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 UBL4BQ8N7F7 174 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 TTC13Q8NBP0 860 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 HEXDCQ8WVB3 486 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 OR52A5Q9H2C5 316 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 LRRC40Q9H9A6 602 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 VPS37BQ9H9H4 285 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 FANCEQ9HB96 536 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 NLE1Q9NVX2 485 aaPredicted RBP16.61■□□□□ 0.25
TRIM39-209ENST00000428728 BTRCQ9Y297 605 aa16.61■□□□□ 0.25
TRIM39-209ENST00000428728 R3HDM2Q9Y2K5 976 aaKnown RBP16.61■□□□□ 0.25
TRIM39-209ENST00000428728 TRBV5-4A0A0C4DH59 114 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 A0A0U1RQJ8 604 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 ZNF189O75820 626 aaPredicted RBP16.6■□□□□ 0.25
TRIM39-209ENST00000428728 PDHA2P29803 388 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 ABRQ12979 859 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 IL10RAQ13651 578 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 PARP6Q2NL67 630 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms