RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 MRPL9Q9BYD2 267 aaKnown RBP8.23□□□□□ -1.09
CD44-208ENST00000428726 HPS4Q9NQG7 708 aa8.23□□□□□ -1.09
CD44-208ENST00000428726 PRDM8Q9NQV8 689 aa8.23□□□□□ -1.09
CD44-208ENST00000428726 SCHIP1Q9P0W5 487 aaPredicted RBP8.23□□□□□ -1.09
CD44-208ENST00000428726 B4GALT6Q9UBX8 382 aa8.23□□□□□ -1.09
CD44-208ENST00000428726 RIMKLBQ9ULI2 386 aa8.23□□□□□ -1.09
CD44-208ENST00000428726 PLAGL1Q9UM63 463 aa8.23□□□□□ -1.09
CD44-208ENST00000428726 SLC22A14Q9Y267 594 aa8.23□□□□□ -1.09
CD44-208ENST00000428726 GLYATL1P3A0A0U1RQE8 302 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 PRMT5O14744 637 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 DFNA5O60443 496 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 WISP3O95389 354 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 STAMBPO95630 424 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TACR1P25103 407 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 HNF4AP41235 474 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 XIAPP98170 497 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 LCP2Q13094 533 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 PRKG2Q13237 762 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 RFTN1Q14699 578 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 IMPG1Q17R60 797 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 CRTC1Q6UUV9 634 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 GPRIN3Q6ZVF9 776 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 GOLGA7Q7Z5G4 137 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 SLC15A3Q8IY34 581 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 CBR4Q8N4T8 237 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 GPR150Q8NGU9 434 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 SGCDQ92629 289 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 HSPBAP1Q96EW2 488 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TMEM121BQ9BXQ6 578 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 IKZF5Q9H5V7 419 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 PCTPQ9UKL6 214 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TRIOBPQ9H2D6 2365 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 ASPDHA6ND91 283 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 OTOL1A6NHN0 477 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 K7ESM1 405 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 HOXA2O43364 376 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 NOBOXO60393 691 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 ABLIM3O94929 683 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 MLYCDO95822 493 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 CYBBP04839 570 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 HSPA1AP0DMV8 641 aaKnown RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 HSPA1BP0DMV9 641 aaKnown RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 MYCLP1P12525 358 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 SRCP12931 536 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TYRP14679 529 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 LBPP18428 481 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 OGNP20774 298 aaKnown RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 STT3AP46977 705 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 MNX1P50219 401 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 MYBPC1Q00872 1141 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 NFATC2Q13469 925 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TRIM25Q14258 630 aaKnown RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 MAPRE2Q15555 327 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 ZXDCQ2QGD7 858 aaPredicted RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 FAM174BQ3ZCQ3 159 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TMEM31Q5JXX7 168 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 C6orf136Q5SQH8 315 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 ALG1LQ6GMV1 187 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 SUSD1Q6UWL2 747 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 UGT2A3Q6UWM9 527 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 GCNT7Q6ZNI0 430 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 UTS2BQ765I0 119 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 DHFR2Q86XF0 187 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 CRIPAKQ8N1N5 446 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TRIML2Q8N7C3 387 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 ITFG1Q8TB96 612 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 TMEM79Q9BSE2 394 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 MEAF6Q9HAF1 191 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 POPDC3Q9HBV1 291 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 SPAG4Q9NPE6 437 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 ZDHHC7Q9NXF8 308 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 URB1O60287 2271 aaKnown RBP8.22□□□□□ -1.09
CD44-208ENST00000428726 SPTBP11277 2137 aa8.22□□□□□ -1.09
CD44-208ENST00000428726 A0A0G2JN53 185 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 CCDC154A6NI56 674 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 GAPDHSO14556 408 aaPredicted RBP8.21□□□□□ -1.09
CD44-208ENST00000428726 ACOT8O14734 319 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 VILLO15195 856 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 NME6O75414 186 aaPredicted RBP8.21□□□□□ -1.09
CD44-208ENST00000428726 ZNF821O75541 412 aaPredicted RBP8.21□□□□□ -1.09
CD44-208ENST00000428726 LEFTY1O75610 366 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 PGLSO95336 258 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 PDHA2P29803 388 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 CCR7P32248 378 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 KCNK10P57789 538 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 GTF2H2Q13888 395 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 KCTD21Q4G0X4 260 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 SPANXN4Q5MJ08 99 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 HMBOX1Q6NT76 420 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 GTF2H2CQ6P1K8 395 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 CRTC3Q6UUV7 619 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 ZBTB49Q6ZSB9 765 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 CHSY3Q70JA7 882 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 OR10A6Q8NH74 314 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 POF1BQ8WVV4 589 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 NCLNQ969V3 563 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 KIAA1191Q96A73 305 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 L3HYPDHQ96EM0 354 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 CEP295NLQ96MC4 621 aa8.21□□□□□ -1.09
CD44-208ENST00000428726 TRAPPC9Q96Q05 1148 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms