RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CD151P48509 253 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 GPX6P59796 221 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 PLCL1Q15111 1095 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 ZNF549Q6P9A3 640 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 WASH2PQ6VEQ5 465 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 MARCH9Q86YJ5 346 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 GSPT2Q8IYD1 628 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 PPM1NQ8N819 430 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 SIDT2Q8NBJ9 832 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 UBXN4Q92575 508 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 TFGQ92734 400 aaPredicted RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 RMDN2Q96LZ7 410 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 GFM1Q96RP9 751 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 TBC1D10AQ9BXI6 508 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 RDH14Q9HBH5 336 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 WASH6PQ9NQA3 447 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 MOCS1Q9NZB8 636 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 ATXN7L1Q9ULK2 861 aaPredicted RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 ASF1AQ9Y294 204 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 TDRKHQ9Y2W6 561 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 PCDHGA1Q9Y5H4 931 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 COLEC10Q9Y6Z7 277 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 TCRBV9S1A1TA0A576 114 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 CXorf49A8MYA2 514 aaPredicted RBP14.23□□□□□ -0.13
SGCE-204ENST00000428696 B4GAT1O43505 415 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 VPS26AO75436 327 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 TOP3BO95985 862 aaKnown RBP14.23□□□□□ -0.13
SGCE-204ENST00000428696 GP1BAP07359 652 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 GSTA2P09210 222 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 MPSTP25325 297 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 GABRB3P28472 473 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 PHBP35232 272 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 INSM1Q01101 510 aaPredicted RBP14.23□□□□□ -0.13
SGCE-204ENST00000428696 PLOD1Q02809 727 aaPredicted RBP14.23□□□□□ -0.13
SGCE-204ENST00000428696 RPA4Q13156 261 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 SPIDRQ14159 915 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 GPR18Q14330 331 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 UAP1Q16222 522 aaPredicted RBP14.23□□□□□ -0.13
SGCE-204ENST00000428696 KIAA0408Q6ZU52 694 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 C17orf82Q86X59 251 aaPredicted RBP14.23□□□□□ -0.13
SGCE-204ENST00000428696 VRK3Q8IV63 474 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 SPNS2Q8IVW8 549 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 AVL9Q8NBF6 648 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 OR10G6Q8NH81 332 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 NCSTNQ92542 709 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 ELMO2Q96JJ3 720 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 AARSD1Q9BTE6 412 aaKnown RBP14.23□□□□□ -0.13
SGCE-204ENST00000428696 LRRN3Q9H3W5 708 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 SLC40A1Q9NP59 571 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 NINJ2Q9NZG7 142 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 PSAT1Q9Y617 370 aa14.23□□□□□ -0.13
SGCE-204ENST00000428696 SPTBN2O15020 2390 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 SLC5A10A0PJK1 596 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 PRR19A6NJB7 356 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 BHMG1C9JSJ3 638 aaPredicted RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 CDK4P11802 303 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 STX2P32856 288 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 FASLGP48023 281 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 ADARP55265 1226 aaKnown RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 UBE2IP63279 158 aaKnown RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 FRG1Q14331 258 aaKnown RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 TTLL9Q3SXZ7 439 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 MAP9Q49MG5 647 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 SNAP47Q5SQN1 464 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 RBM20Q5T481 1227 aaKnown RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 HES3Q5TGS1 186 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 CAPRIN2Q6IMN6 1127 aaKnown RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 SPRED1Q7Z699 444 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 PIM3Q86V86 326 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 CNTN4Q8IWV2 1026 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 ZBTB2Q8N680 514 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 ADAMTS14Q8WXS8 1223 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 GPR21Q99679 349 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 HGH1Q9BTY7 390 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 OR52A5Q9H2C5 316 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 SMYD2Q9NRG4 433 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 POT1Q9NUX5 634 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 NSMCE4AQ9NXX6 385 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 TRMT6Q9UJA5 497 aaKnown RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 RUVBL2Q9Y230 463 aaKnown RBP14.22□□□□□ -0.13
SGCE-204ENST00000428696 HEBP2Q9Y5Z4 205 aa14.22□□□□□ -0.13
SGCE-204ENST00000428696 DCHS1Q96JQ0 3298 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 SPAG6O75602 509 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 MT-CO3P00414 261 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 FAM153BP0C7A2 387 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 PNLIPP16233 465 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 MCM3P25205 808 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 GPR3P46089 330 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 SLC12A2P55011 1212 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 CDKN2DP55273 166 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 TUBB4BP68371 445 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 CBLBQ13191 982 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 SLMAPQ14BN4 828 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 KBTBD12Q3ZCT8 623 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 FAM153CQ494X1 144 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 ACSBG2Q5FVE4 666 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 PLEKHS1Q5SXH7 462 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 PHF19Q5T6S3 580 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms