RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 RHOJQ9H4E5 214 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 MKKSQ9NPJ1 570 aaPredicted RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 SDHAF3Q9NRP4 125 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 WBP11Q9Y2W2 641 aaKnown RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 FAM172BPA6NC97 362 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 H0YJX3 145 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 RB1P06400 928 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 PGAM2P15259 253 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 CDKL1Q00532 357 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 SP140Q13342 867 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 TMEM220Q6QAJ8 160 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ATAD1Q8NBU5 361 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 SETD7Q8WTS6 366 aaKnown RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 RCN3Q96D15 328 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ZSWIM3Q96MP5 696 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 LGR4Q9BXB1 951 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ATG10Q9H0Y0 220 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 CLDND1Q9NY35 253 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 FBXO9Q9UK97 447 aaPredicted RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 A0A0J9YYE9 177 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 GPR25O00155 361 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 SLC30A4O14863 429 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 RGS10O43665 173 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 C8GP07360 202 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 RAB39AQ14964 217 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 DLG2Q15700 870 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 GXYLT1Q4G148 440 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 RNF19BQ6ZMZ0 732 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 CHERPQ8IWX8 916 aaKnown RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 CPSF7Q8N684 471 aaKnown RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 PLA2G15Q8NCC3 412 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 SLC35G5Q96KT7 338 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 TRPV5Q9NQA5 729 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 C8orf4Q9NR00 106 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 NR2E1Q9Y466 385 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 PCDHB3Q9Y5E6 796 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 PCDHGB7Q9Y5F8 929 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 KLRG2A4D1S0 409 aaPredicted RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 ELOA3DA6NLF2 546 aaPredicted RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 TNFRSF10BO14763 440 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 PDPK1O15530 556 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 AP2A2O94973 939 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 PRH1P02810 166 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ANPEPP15144 967 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 CYP3A5P20815 502 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 EPHA3P29320 983 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 NR1H2P55055 460 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 CYP4F8P98187 520 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 NRG1Q02297 640 aaPredicted RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 GPM6BQ13491 265 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 SLC1A5Q15758 541 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 EML3Q32P44 896 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ELOA3BQ3SY89 546 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 SH3D19Q5HYK7 790 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ZNF227Q86WZ6 799 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 C10orf107Q8IVU9 208 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ZNF615Q8N8J6 731 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 KREMEN2Q8NCW0 462 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ELOA3Q8NG57 546 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 TTLQ8NG68 377 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 TNFAIP8L1Q8WVP5 186 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ART5Q96L15 291 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 PTPN18Q99952 460 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 MAGEH1Q9H213 219 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 ENY2Q9NPA8 101 aa8.82□□□□□ -1
CTNND1-208ENST00000428599 RCOR3Q9P2K3 495 aaPredicted RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 PRPF19Q9UMS4 504 aaKnown RBP8.82□□□□□ -1
CTNND1-208ENST00000428599 ATP6AP2A0A1C7CYW4 349 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 ARL5CA6NH57 179 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 CPSF4LA6NMK7 179 aaKnown RBP8.81□□□□□ -1
CTNND1-208ENST00000428599 B4DGG1 531 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 ATP6AP2O75787 350 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 IPO13O94829 963 aaKnown RBP8.81□□□□□ -1
CTNND1-208ENST00000428599 FADS2O95864 444 aaKnown RBP8.81□□□□□ -1
CTNND1-208ENST00000428599 CSTF2P33240 577 aaKnown RBP eCLIP8.81□□□□□ -11e-7■■□□□ 12.3
CTNND1-208ENST00000428599 RPS9P46781 194 aaKnown RBP8.81□□□□□ -1
CTNND1-208ENST00000428599 PER3P56645 1201 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 ADAM8P78325 824 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 TNFAIP8L3Q5GJ75 292 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 ARMC10Q8N2F6 343 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 GPR151Q8TDV0 419 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 TP53INP1Q96A56 240 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 TMEM125Q96AQ2 219 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 P2RY11Q96G91 374 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 MUC13Q9H3R2 512 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 TCF7L1Q9HCS4 588 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 ZNF639Q9UID6 485 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 NCANO14594 1321 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 OR14I1A6ND48 311 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 PRORSD1PA6NEY8 169 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 NEMP2A6NFY4 417 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 L7N2F9 121 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 NUAK1O60285 661 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 TSPAN9O75954 239 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 GSTT2BP0CG30 244 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 CXCR1P25024 350 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 CCR10P46092 362 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 OR3A3P47888 321 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 OR3A2P47893 321 aa8.81□□□□□ -1
CTNND1-208ENST00000428599 VAMP2P63027 116 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms