RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 NDUFA2O43678 99 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 IFI30P13284 250 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 CA5AP35218 305 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 ATXN1P54253 815 aaKnown RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 MAP3K7CLP57077 242 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 CSNK2BP67870 215 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 CD83Q01151 205 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 MFSD13AQ14CX5 517 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 TBCEQ15813 527 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 FAM214AQ32MH5 1076 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 C2CD4AQ8NCU7 369 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 TAAR1Q96RJ0 339 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 GTPBP2Q9BX10 602 aaKnown RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 MRPL4Q9BYD3 311 aaKnown RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 BRINP2Q9C0B6 783 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 SLC22A4Q9H015 551 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 C3orf14Q9HBI5 128 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 SLAMF8Q9P0V8 285 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 SIX4Q9UIU6 781 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 AGO1Q9UL18 857 aaKnown RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 SNX7Q9UNH6 387 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 SSC5DA1L4H1 1573 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 CCDC182A6NF36 153 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 ACKR2O00590 384 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 OR2B3O76000 313 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 PRR35P0CG20 571 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 ICAM2P13598 275 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 TPH1P17752 444 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 IGFBP5P24593 272 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 POLR2JP52435 117 aaKnown RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 HERVK_113P63132 956 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 SH3BP2P78314 561 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 MAD2L1BPQ15013 274 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 NKG7Q16617 165 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 BTBD16Q32M84 506 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 NAPEPLDQ6IQ20 393 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 PKN3Q6P5Z2 889 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 DPH6Q7L8W6 267 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 TMEM179BQ7Z7N9 219 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 PYROXD2Q8N2H3 581 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 DTX3Q8N9I9 347 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 OR4M2Q8NGB6 313 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 CDCA5Q96FF9 252 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 TRNT1Q96Q11 434 aaKnown RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 ACOX2Q99424 681 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 ERVK-6Q9BXR3 956 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 FAM124BQ9H5Z6 455 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-206ENST00000428313 PIF1Q9H611 641 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 FZD10Q9ULW2 581 aa15.84■□□□□ 0.13
C9orf3-206ENST00000428313 MGAMO43451 1857 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 CITO14578 2027 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 FAM234BA2RU67 622 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 KCNK1O00180 336 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 PLD2O14939 933 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 SLC22A3O75751 556 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 SCO1O75880 301 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 SLC1A2P43004 574 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 ETV1P50549 477 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 SCNN1GP51170 649 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 SLC14A2Q15849 920 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 FAM98CQ17RN3 349 aaKnown RBP15.83■□□□□ 0.13
C9orf3-206ENST00000428313 TOR1AIP1Q5JTV8 583 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 PCID2Q5JVF3 399 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 FAM219BQ5XKK7 198 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 ENPP6Q6UWR7 440 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 VWA5B2Q8N398 1253 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 FAM86B1Q8N7N1 296 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.83■□□□□ 0.13
C9orf3-206ENST00000428313 PDCD2LQ9BRP1 358 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 UQCC2Q9BRT2 126 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 RHNO1Q9BSD3 238 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 MAGIXQ9H6Y5 334 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 UCKL1Q9NWZ5 548 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 TRHDEQ9UKU6 1024 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 INVSQ9Y283 1065 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 PTGDR2Q9Y5Y4 395 aa15.83■□□□□ 0.13
C9orf3-206ENST00000428313 UBR3Q6ZT12 1888 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 CDK14O94921 469 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 CYBBP04839 570 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 ITGB6P18564 788 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 MYL9P24844 172 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 KRT20P35900 424 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 SCNN1AP37088 669 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 BCAT1P54687 386 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 DIO3P55073 304 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 MGAT3Q09327 533 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 BAMBIQ13145 260 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 ASAH1Q13510 395 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 LAPTM5Q13571 262 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 DSC3Q14574 896 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 TIGD6Q17RP2 521 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 GOLGA7BQ2TAP0 167 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 FBXO43Q4G163 708 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 MAP1SQ66K74 1059 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-206ENST00000428313 XRRA1Q6P2D8 792 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 FAM196AQ6ZSG2 479 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 DPP9Q86TI2 863 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 YIPF7Q8N8F6 280 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 ELMO1Q92556 727 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms