RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 KLHDC8BQ8IXV7 354 aa16.95■□□□□ 0.3
DDR1-235ENST00000428153 LRRC45Q96CN5 670 aa16.95■□□□□ 0.3
DDR1-235ENST00000428153 FICDQ9BVA6 458 aa16.95■□□□□ 0.3
DDR1-235ENST00000428153 AKIRIN1Q9H9L7 192 aaPredicted RBP16.95■□□□□ 0.3
DDR1-235ENST00000428153 FKBPLQ9UIM3 349 aa16.95■□□□□ 0.3
DDR1-235ENST00000428153 PLAAQ9Y263 795 aa16.95■□□□□ 0.3
DDR1-235ENST00000428153 F5H423 210 aaPredicted RBP16.94■□□□□ 0.3
DDR1-235ENST00000428153 NR1D1P20393 614 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 ITGALP20701 1170 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 CTNNA1P35221 906 aaKnown RBP16.94■□□□□ 0.3
DDR1-235ENST00000428153 CD151P48509 253 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 MARCKSL1P49006 195 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 RPA4Q13156 261 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 GSE1Q14687 1217 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 ANKRD20A2Q5SQ80 823 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 CCDC181Q5TID7 509 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 ANKRD20A1Q5TYW2 823 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 ANKRD20A3Q5VUR7 823 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 CERS6Q6ZMG9 384 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 SNX20Q7Z614 316 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 DAAM2Q86T65 1068 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 HPS6Q86YV9 775 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 NXPE1Q8N323 547 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
DDR1-235ENST00000428153 ACTL9Q8TC94 416 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 CPT1BQ92523 772 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 KRT35Q92764 455 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 RMDN2Q96LZ7 410 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 COPS8Q99627 209 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 TSPY26PQ9H489 355 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 GOLPH3Q9H4A6 298 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 VPS37BQ9H9H4 285 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 SOHLH2Q9NX45 425 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 CRLS1Q9UJA2 301 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 PCDHA3Q9Y5H8 950 aa16.94■□□□□ 0.3
DDR1-235ENST00000428153 IGLV3-16A0A075B6K0 115 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 H7C0S8 307 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 MEN1O00255 615 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 PJA2O43164 708 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 MAP3K7O43318 606 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 ATP1B2P14415 290 aaPredicted RBP16.93■□□□□ 0.3
DDR1-235ENST00000428153 ZNF140P52738 457 aaPredicted RBP16.93■□□□□ 0.3
DDR1-235ENST00000428153 GPS2Q13227 327 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 KRT33BQ14525 404 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 PTPRCAPQ14761 206 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 SPA17Q15506 151 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 DUS1LQ6P1R4 473 aaKnown RBP16.93■□□□□ 0.3
DDR1-235ENST00000428153 FAM199XQ6PEV8 388 aaPredicted RBP16.93■□□□□ 0.3
DDR1-235ENST00000428153 SARM1Q6SZW1 724 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 CFAP206Q8IYR0 622 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 DSELQ8IZU8 1212 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 TC2NQ8N9U0 490 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 ADAMTS17Q8TE56 1095 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 MR1Q95460 341 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 RNF31Q96EP0 1072 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 SPATA13Q96N96 652 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 DPH2Q9BQC3 489 aaPredicted RBP16.93■□□□□ 0.3
DDR1-235ENST00000428153 SLC25A23Q9BV35 468 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 HEMGNQ9BXL5 484 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 NLNQ9BYT8 704 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 TRIM55Q9BYV6 548 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 PITPNM3Q9BZ71 974 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 ING2Q9H160 280 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 TFB2MQ9H5Q4 396 aaKnown RBP16.93■□□□□ 0.3
DDR1-235ENST00000428153 MVB12BQ9H7P6 319 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 PCDHA13Q9Y5I0 950 aa16.93■□□□□ 0.3
DDR1-235ENST00000428153 TRBV5-4A0A0C4DH59 114 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 CCDC66A2RUB6 948 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 IFRD1O00458 451 aaPredicted RBP16.92■□□□□ 0.3
DDR1-235ENST00000428153 CEACAM4O75871 244 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 RBP3P10745 1247 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 POLR2CP19387 275 aaPredicted RBP16.92■□□□□ 0.3
DDR1-235ENST00000428153 CDH3P22223 829 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 PSMB4P28070 264 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 RORAP35398 523 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 CYLC1P35663 651 aaPredicted RBP16.92■□□□□ 0.3
DDR1-235ENST00000428153 CETN2P41208 172 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 PGDP52209 483 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 OTUD4Q01804 1114 aaKnown RBP16.92■□□□□ 0.3
DDR1-235ENST00000428153 GPR19Q15760 415 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 ZNF658BQ4V348 819 aaPredicted RBP16.92■□□□□ 0.3
DDR1-235ENST00000428153 PLEKHS1Q5SXH7 462 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 ZNF449Q6P9G9 518 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 GALNT11Q8NCW6 608 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 OR13C4Q8NGS5 318 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 PSMG3-AS1Q96PY0 264 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 RUFY1Q96T51 708 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 OSBPL8Q9BZF1 889 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 CHST8Q9H2A9 424 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 OR52A5Q9H2C5 316 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 SRMSQ9H3Y6 488 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 COG4Q9H9E3 785 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 ACSS2Q9NR19 701 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 ZDHHC3Q9NYG2 299 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 MED13Q9UHV7 2174 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 UTP20O75691 2785 aaKnown RBP16.92■□□□□ 0.3
DDR1-235ENST00000428153 TEX15Q9BXT5 2789 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 NBPF19A0A087WUL8 3843 aa16.92■□□□□ 0.3
DDR1-235ENST00000428153 SPTBP11277 2137 aa16.91■□□□□ 0.3
DDR1-235ENST00000428153 DNAJB5O75953 348 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms