RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 A0A0A0MRY4 1105 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ILVBLA1L0T0 632 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ARL5CA6NH57 179 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SUV39H1O43463 412 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 LDB2O43679 373 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PLOD3O60568 738 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 GPR37L1O60883 481 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 RPP40O75818 363 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 LRATO95237 230 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 MT-CYBP00156 380 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 PGRP06401 933 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 ZNF8P17098 575 aaPredicted RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 CYP3A5P20815 502 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CALB2P22676 271 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 MIPP30301 263 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 CLRN1P58418 232 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 DSTNP60981 165 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 MRPL58Q14197 206 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 MTFR2Q6P444 385 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 FAM92BQ6ZTR7 304 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PLD6Q8N2A8 252 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 SCLYQ96I15 445 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 SPATA13Q96N96 652 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 USP29Q9HBJ7 922 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 WDR6Q9NNW5 1121 aaKnown RBP5.66□□□□□ -1.5
HERC4-206ENST00000427635 ARL8BQ9NVJ2 186 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 PCDHB10Q9UN67 800 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 MEMO1Q9Y316 297 aa5.66□□□□□ -1.5
HERC4-206ENST00000427635 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 NPEPPSL1A6NEC2 478 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 FAM155AB1AL88 458 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 H3BQF6 201 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PRMT5O14744 637 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 PDPK1O15530 556 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 REM1O75628 298 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 KLF8O95600 359 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 GLI1P08151 1106 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ALOX5P09917 674 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PKMP14618 531 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 VHLP40337 213 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 CCR8P51685 355 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 TMBIM6P55061 237 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 MAPK7Q13164 816 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 FASTKD3Q14CZ7 662 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 ITPRIPL2Q3MIP1 535 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PTPN20Q4JDL3 420 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 INTS6LQ5JSJ4 861 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 AADACL4Q5VUY2 407 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 NPLOC4Q8TAT6 608 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZNF473Q8WTR7 871 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 NXPE2Q96DL1 559 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PRR11Q96HE9 360 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 UBXN10Q96LJ8 280 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 TMBIM4Q9HC24 238 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ABCB8Q9NUT2 735 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 SSR3Q9UNL2 185 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 A0A1B0GVM2 712 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 C2orf72A6NCS6 295 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 TCAF2A6NFQ2 919 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 GLSO94925 669 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 GJB6O95452 261 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PRLP01236 227 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 HBQ1P09105 142 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 UBTFL6P0CB48 400 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 HOXB9P17482 250 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 FBLP22087 321 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 ACVR2AP27037 513 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 RACK1P63244 317 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 OCLNQ16625 522 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZNF792Q3KQV3 632 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ALG10Q5BKT4 473 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 MANEAQ5SRI9 462 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 WDR59Q6PJI9 974 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 SLC2A7Q6PXP3 512 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 OTOP1Q7RTM1 612 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 GPR151Q8TDV0 419 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 RHBDD1Q8TEB9 315 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 EZH1Q92800 747 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 MIEF2Q96C03 454 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZBTB45Q96K62 511 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 KXD1Q9BQD3 176 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 MGME1Q9BQP7 344 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 THAP1Q9NVV9 213 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ERVK-18Q9QC07 812 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZNF490Q9ULM2 529 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 PCDHA2Q9Y5H9 948 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 A0A1W2PRG6 482 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PCP4L1A6NKN8 68 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 SPATA31C2B4DYI2 1134 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 NPIPA2E9PIF3 369 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 NPIPA3F8WFD2 350 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PHGDHO43175 533 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZNF254O75437 659 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ALDOAP04075 364 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 C8GP07360 202 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ENDOUP21128 410 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 IDH2P48735 452 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 PTPN5P54829 565 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 GMFBP60983 142 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 UBE2NP61088 152 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms