RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TPD52P55327 224 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-204ENST00000424143 HUNKP57058 714 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 CYP4F3Q08477 520 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 FADDQ13158 208 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 MAP2K5Q13163 448 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 CTU2Q2VPK5 515 aaKnown RBP14.98□□□□□ -0.01
C9orf3-204ENST00000424143 FAM219BQ5XKK7 198 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 DCP2Q8IU60 420 aaKnown RBP14.98□□□□□ -0.01
C9orf3-204ENST00000424143 MICU2Q8IYU8 434 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 LGI2Q8N0V4 545 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 PGBD3Q8N328 593 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 SCAIQ8N9R8 606 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 FAR1Q8WVX9 515 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 TAMM41Q96BW9 452 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 RHBDF1Q96CC6 855 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 ABHD8Q96I13 439 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 NSMCE3Q96MG7 304 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 PPM1MQ96MI6 270 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 PARK7Q99497 189 aaKnown RBP14.98□□□□□ -0.01
C9orf3-204ENST00000424143 CCNB1IP1Q9NPC3 277 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 PAK1IP1Q9NWT1 392 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-204ENST00000424143 TRNAU1APQ9NX07 287 aaKnown RBP14.98□□□□□ -0.01
C9orf3-204ENST00000424143 CD274Q9NZQ7 290 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 FAM50BQ9Y247 325 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 MAN2B2Q9Y2E5 1009 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 DHRS7Q9Y394 339 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 PCDHB1Q9Y5F3 818 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 TRPM7Q96QT4 1865 aa14.98□□□□□ -0.01
C9orf3-204ENST00000424143 GREB1Q4ZG55 1949 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 A0A0U1RQF3 1178 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 CXCR6O00574 342 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 RGS14O43566 566 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 JRKO75564 520 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 GLUD1P00367 558 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 IGHA2P01877 340 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 NFKBIAP25963 317 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 CASP2P42575 452 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 CSNK2BP67870 215 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 CDC20Q12834 499 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 CDK5R2Q13319 367 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 MEP1AQ16819 746 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 AP5B1Q2VPB7 878 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 LRIF1Q5T3J3 769 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 LETMD1Q6P1Q0 360 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 TUBA3EQ6PEY2 450 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 SHQ1Q6PI26 577 aaKnown RBP14.97□□□□□ -0.01
C9orf3-204ENST00000424143 MSANTD1Q6ZTZ1 278 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 TRIM46Q7Z4K8 759 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 MFSD4AQ8N468 514 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 SVOPQ8N4V2 548 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 CDYL2Q8N8U2 506 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 OR6Q1Q8NGQ2 317 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 DACH2Q96NX9 599 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 C17orf80Q9BSJ5 609 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.97□□□□□ -0.01
C9orf3-204ENST00000424143 MTRRQ9UBK8 725 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 WARS2Q9UGM6 360 aaKnown RBP14.97□□□□□ -0.01
C9orf3-204ENST00000424143 EIF2B4Q9UI10 523 aaKnown RBP14.97□□□□□ -0.01
C9orf3-204ENST00000424143 A3GALT2U3KPV4 340 aa14.97□□□□□ -0.01
C9orf3-204ENST00000424143 CCL15-CCL14A0A0B4J2E2 113 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 ISPDA4D126 451 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 ENPP3O14638 875 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 AQP9O43315 295 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 DPM1O60762 260 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 MT-ND1P03886 318 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 CAPN1P07384 714 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 IL7RP16871 459 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 TGM1P22735 817 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 MTPNP58546 118 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 GALNT3Q14435 633 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 PTPRCAPQ14761 206 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 NKG7Q16617 165 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 CCL15Q16663 113 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 CYP2A13Q16696 494 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 CTSL3PQ5NE16 218 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 DEFB132Q7Z7B7 95 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 ARL10Q8N8L6 244 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 OR7A2PQ8NGA2 310 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 OR4K2Q8NGD2 314 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 UBTD2Q8WUN7 234 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 RORBQ92753 470 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 LINGO1Q96FE5 620 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 RPL10LQ96L21 214 aaKnown RBP14.96□□□□□ -0.01
C9orf3-204ENST00000424143 EPS8L2Q9H6S3 715 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 CARS2Q9HA77 564 aaKnown RBP14.96□□□□□ -0.01
C9orf3-204ENST00000424143 SMURF2Q9HAU4 748 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 VAPAQ9P0L0 249 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 LIMD1Q9UGP4 676 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 DAPK2Q9UIK4 370 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 TMEFF2Q9UIK5 374 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-204ENST00000424143 SPO11Q9Y5K1 396 aa14.96□□□□□ -0.01
C9orf3-204ENST00000424143 TMEM247A6NEH6 219 aa14.95□□□□□ -0.02
C9orf3-204ENST00000424143 OR7A17O14581 309 aa14.95□□□□□ -0.02
C9orf3-204ENST00000424143 INSIG1O15503 277 aa14.95□□□□□ -0.02
C9orf3-204ENST00000424143 CA12O43570 354 aa14.95□□□□□ -0.02
C9orf3-204ENST00000424143 DFNA5O60443 496 aa14.95□□□□□ -0.02
C9orf3-204ENST00000424143 RPS3P23396 243 aaKnown RBP eCLIP14.95□□□□□ -0.02
C9orf3-204ENST00000424143 HOXD9P28356 352 aaPredicted RBP14.95□□□□□ -0.02
C9orf3-204ENST00000424143 OR1E1P30953 314 aa14.95□□□□□ -0.02
C9orf3-204ENST00000424143 HPCAL1P37235 193 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms