RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 EIF3BP55884 814 aaKnown RBP18.03■□□□□ 0.48
HDAC6-205ENST00000423941 SPIDRQ14159 915 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 PTRHD1Q6GMV3 140 aaKnown RBP18.03■□□□□ 0.48
HDAC6-205ENST00000423941 ZNF574Q6ZN55 896 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-205ENST00000423941 RBM44Q6ZP01 1051 aaKnown RBP18.03■□□□□ 0.48
HDAC6-205ENST00000423941 PDZD3Q86UT5 571 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 SLITRK4Q8IW52 837 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 SLC22A15Q8IZD6 547 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 KRT222Q8N1A0 295 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 OTUD6BQ8N6M0 293 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 PYROXD1Q8WU10 500 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 ASZ1Q8WWH4 475 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 CXorf40BQ96DE9 158 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 C12orf66Q96MD2 445 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 SLC38A3Q99624 504 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 TSSK1BQ9BXA7 367 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 IARS2Q9NSE4 1012 aaKnown RBP18.03■□□□□ 0.48
HDAC6-205ENST00000423941 KCNK4Q9NYG8 393 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 OGFRQ9NZT2 677 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 ENTPD2Q9Y5L3 495 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 HEBP2Q9Y5Z4 205 aa18.03■□□□□ 0.48
HDAC6-205ENST00000423941 UBA6A0AVT1 1052 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 FAM149AA5PLN7 773 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 ESPNB1AK53 854 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 C1QAP02745 245 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 AHSGP02765 367 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 CCKBRP32239 447 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 PREPP48147 710 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 BOP1Q14137 746 aaKnown RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 GPR18Q14330 331 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 ZNF449Q6P9G9 518 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 CNSTQ6PJW8 725 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 WDR74Q6RFH5 385 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 ZNF761Q86XN6 746 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 MARCH9Q86YJ5 346 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 RELL1Q8IUW5 271 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 GABPB2Q8TAK5 448 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 GSDMBQ8TAX9 411 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 CFAP36Q96G28 342 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 DEPDC7Q96QD5 511 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 DPYSL5Q9BPU6 564 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 TBC1D10AQ9BXI6 508 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 KIR3DX1Q9H7L2 352 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 SAYSD1Q9NPB0 183 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 FBXO6Q9NRD1 293 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 KLHL42Q9P2K6 505 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 FAM8A1Q9UBU6 413 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 ATXN7L1Q9ULK2 861 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 CFAP20Q9Y6A4 193 aaKnown RBP18.02■□□□□ 0.48
HDAC6-205ENST00000423941 COMMD10Q9Y6G5 202 aa18.02■□□□□ 0.48
HDAC6-205ENST00000423941 NIPSNAP2O75323 286 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 CSO75390 466 aaKnown RBP18.01■□□□□ 0.47
HDAC6-205ENST00000423941 GSTA2P09210 222 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 ITGB6P18564 788 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 CD9P21926 228 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 NDUFS1P28331 727 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 ECHS1P30084 290 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 CSF2RBP32927 897 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 MPP1Q00013 466 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 TIAL1Q01085 375 aaKnown RBP eCLIP18.01■□□□□ 0.47
HDAC6-205ENST00000423941 MGAT5Q09328 741 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 BIRC2Q13490 618 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 PLEKHS1Q5SXH7 462 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 NAPRTQ6XQN6 538 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 USP53Q70EK8 1073 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 PIM3Q86V86 326 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 VRK3Q8IV63 474 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 TRIM48Q8IWZ4 208 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 OR4D9Q8NGE8 314 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 OR10G6Q8NH81 332 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 TFGQ92734 400 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-205ENST00000423941 GATA6Q92908 595 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 TMEM159Q96B96 161 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 MCMBPQ9BTE3 642 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 TWSG1Q9GZX9 223 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 RAB33BQ9H082 229 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 MVB12BQ9H7P6 319 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 IMP3Q9NV31 184 aaKnown RBP18.01■□□□□ 0.47
HDAC6-205ENST00000423941 GALPQ9UBC7 116 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 SLC24A2Q9UI40 661 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 COLEC10Q9Y6Z7 277 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 KIF26BQ2KJY2 2108 aa18.01■□□□□ 0.47
HDAC6-205ENST00000423941 IFRD1O00458 451 aaPredicted RBP18■□□□□ 0.47
HDAC6-205ENST00000423941 CAPNS1P04632 268 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 APOA4P06727 396 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 F7P08709 466 aaPredicted RBP18■□□□□ 0.47
HDAC6-205ENST00000423941 HOXB3P14651 431 aaPredicted RBP18■□□□□ 0.47
HDAC6-205ENST00000423941 SSTR1P30872 391 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 MAGEA4P43358 317 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 CARSP49589 748 aaKnown RBP18■□□□□ 0.47
HDAC6-205ENST00000423941 CLCN7P51798 805 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 LIMK2P53671 638 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 GPX6P59796 221 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 RTP5Q14D33 572 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 NKAIN2Q5VXU1 208 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 DUS1LQ6P1R4 473 aaKnown RBP18■□□□□ 0.47
HDAC6-205ENST00000423941 TMEM71Q6P5X7 295 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 B3GNT8Q7Z7M8 397 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 LRRN4CLQ8ND94 238 aa18■□□□□ 0.47
HDAC6-205ENST00000423941 KCNJ9Q92806 393 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms