RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 UQCRHP07919 91 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 CD59P13987 128 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 H2AFXP16104 143 aaPredicted RBP17.16■□□□□ 0.34
LINC00271-201ENST00000421378 STMN1P16949 149 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 PGGT1BP53609 377 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 GBX1Q14549 363 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 IYDQ6PHW0 289 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 PDZD3Q86UT5 571 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 VRK3Q8IV63 474 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 CEP97Q8IW35 865 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 CPNE9Q8IYJ1 553 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 ARL10Q8N8L6 244 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
LINC00271-201ENST00000421378 EPS8L3Q8TE67 593 aaKnown RBP17.16■□□□□ 0.34
LINC00271-201ENST00000421378 SETD7Q8WTS6 366 aaKnown RBP17.16■□□□□ 0.34
LINC00271-201ENST00000421378 SKA2Q8WVK7 121 aaPredicted RBP17.16■□□□□ 0.34
LINC00271-201ENST00000421378 BTBD3Q9Y2F9 522 aa17.16■□□□□ 0.34
LINC00271-201ENST00000421378 KIR2DS5A0A0G2JLQ3 304 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 A0A0G2JNG1 304 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SMIM23A6NLE4 172 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 OR52A4PA6NMU1 304 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 KIR2DS3K7RE56 304 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SIGLEC6O43699 453 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 TCEA3O75764 348 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ZNF37AP17032 561 aaPredicted RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ATP5DP30049 168 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SLCO1A2P46721 670 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 LIMK1P53667 647 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 RAB10P61026 200 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ZNF460Q14592 562 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 KIR2DS5Q14953 304 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CLCA4Q14CN2 919 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ZKSCAN8Q15776 578 aaPredicted RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ACSBG2Q5FVE4 666 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 PAQR3Q6TCH7 311 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 NAXDQ8IW45 347 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SFTPA2Q8IWL1 248 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CNPY4Q8N129 248 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SFRP1Q8N474 314 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 KYQ8NBH2 561 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SLC37A2Q8TED4 501 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 PATE1Q8WXA2 126 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 RMDN2Q96LZ7 410 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 C12orf66Q96MD2 445 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 POPDC3Q9HBV1 291 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 GPAMQ9HCL2 828 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SCHIP1Q9P0W5 487 aaPredicted RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ASCC3Q8N3C0 2202 aaKnown RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 DMXL1Q9Y485 3027 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 IQANK1A0A1B0GTG1 560 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 NOBOXO60393 691 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CDH16O75309 829 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CBSLP0DN79 551 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ENO3P13929 434 aaPredicted RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CBSP35520 551 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 RGS4P49798 205 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SERPINB8P50452 374 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CAPRIN2Q6IMN6 1127 aaKnown RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 FBXO38Q6PIJ6 1188 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 OGFOD3Q6PK18 319 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CMC1Q7Z7K0 106 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 TDRPQ86YL5 185 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 SLC35F3Q8IY50 421 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 FAM181AQ8N9Y4 354 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 GPR156Q8NFN8 814 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 MAPK15Q8TD08 544 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 RHBDD1Q8TEB9 315 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 MTBPQ96DY7 904 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 IMP3Q9NV31 184 aaKnown RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CTNNAL1Q9UBT7 734 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 TBK1Q9UHD2 729 aa17.15■□□□□ 0.34
LINC00271-201ENST00000421378 TSR3Q9UJK0 312 aaKnown RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 CFAP20Q9Y6A4 193 aaKnown RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 ARID1BQ8NFD5 2236 aaPredicted RBP17.15■□□□□ 0.34
LINC00271-201ENST00000421378 TRBV23OR9-2A0A075B6M9 112 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 TRIM49D1C9J1S8 452 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 EIF3FO00303 357 aaPredicted RBP17.14■□□□□ 0.33
LINC00271-201ENST00000421378 RASGRF2O14827 1237 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 PHGDHO43175 533 aaKnown RBP17.14■□□□□ 0.33
LINC00271-201ENST00000421378 SH3BP5O60239 455 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 ALDOAP04075 364 aaKnown RBP17.14■□□□□ 0.33
LINC00271-201ENST00000421378 SNRPAP09012 282 aaKnown RBP17.14■□□□□ 0.33
LINC00271-201ENST00000421378 IL2P60568 153 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 RASA2Q15283 850 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 C14orf28Q4W4Y0 310 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 LRRC8EQ6NSJ5 796 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 RAPH1Q70E73 1250 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 NETO1Q8TDF5 533 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 SYTL2Q9HCH5 934 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 SNX15Q9NRS6 342 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 NCKIPSDQ9NZQ3 722 aa17.14■□□□□ 0.33
LINC00271-201ENST00000421378 ZNF624Q9P2J8 865 aaPredicted RBP17.14■□□□□ 0.33
LINC00271-201ENST00000421378 COL5A1P20908 1838 aaPredicted RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 MTHFD1P11586 935 aaKnown RBP17.13■□□□□ 0.33
LINC00271-201ENST00000421378 ACADLP28330 430 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 CRABP2P29373 138 aa17.13■□□□□ 0.33
LINC00271-201ENST00000421378 TYK2P29597 1187 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms