RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 C6orf89Q6UWU4 347 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 SLC51AQ86UW1 340 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 SLC39A3Q9BRY0 314 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 LAMP2P13473 410 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ARF4P18085 180 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ACSL1P33121 698 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TEAD4Q15561 434 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 CPNE8Q86YQ8 564 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 GHDCQ8N2G8 530 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF557Q8N988 423 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 FEM1CQ96JP0 617 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 KCTD7Q96MP8 289 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF347Q96SE7 839 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 C1orf21Q9H246 121 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 RAI2Q9Y5P3 530 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 A0A1W2PQH9 124 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 H3BM21 787 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 B4GALT4O60513 344 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 RBMXL2O75526 392 aaKnown RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TFPTP0C1Z6 253 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 DNASE1L1P49184 302 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 NAE1Q13564 534 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TSTD2Q5T7W7 516 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 DRAXINQ8NBI3 349 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 OR10H5Q8NGA6 315 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 DNASE1L2Q92874 299 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 OXSMQ9NWU1 459 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TMED5Q9Y3A6 229 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 RPL36Q9Y3U8 105 aaKnown RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 A0A1W2PPW3 197 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 E9PAM4 449 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TLR5O60602 858 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 CSTF2P33240 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TAS2R39P59534 338 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TARDBPQ13148 414 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 CBFBQ13951 182 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 GANABQ14697 944 aaKnown RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TGFBIQ15582 683 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 METTL3Q86U44 580 aaKnown RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 PARGQ86W56 976 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 SLC9A6Q92581 669 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 NUSAP1Q9BXS6 441 aaKnown RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF395Q9H8N7 513 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TBCCD1Q9NVR7 557 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 MKLN1Q9UL63 735 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ST14Q9Y5Y6 855 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TCRBV7S3A2A0A539 114 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 TBC1D3BA6NDS4 549 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SPATA31C2B4DYI2 1134 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 KERAO60938 352 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 C22orf31O95567 290 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 NDST3O95803 873 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 AMD1P17707 334 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 VARSP26640 1264 aaKnown RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 ITPKBP27987 946 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 CBLBQ13191 982 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 BTG3Q14201 252 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 ARMC10Q8N2F6 343 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 NAT8LQ8N9F0 302 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 DNAJA4Q8WW22 397 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 AIF1LQ9BQI0 150 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 FZD1Q9UP38 647 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 TRAV19A0A0A6YYK7 116 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 KANTRA0A1W2PQU2 76 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 WRBO00258 174 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 WNT10BO00744 389 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 PAPSS2O95340 614 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 DBIP07108 87 aaKnown RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 LINGO3P0C6S8 592 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SMIM10L2AP0DMW4 78 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SMIM10L2BP0DMW5 78 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 PRPS2P11908 318 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 CTSEP14091 401 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SLC1A2P43004 574 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 CBX2Q14781 532 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 CEP76Q8TAP6 659 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SEC14L1Q92503 715 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 TRIM2Q9C040 744 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 RIMKLBQ9ULI2 386 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 LOC100130705A0A1B0GUX0 176 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 PLA2G4EQ3MJ16 856 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 PARP15Q460N3 678 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SLC30A6Q6NXT4 461 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 SLC37A3Q8NCC5 494 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 BSNDQ8WZ55 320 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 TMEM203Q969S6 136 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 CRELD1Q96HD1 420 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 GAL3ST1Q99999 423 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 OR51V1Q9H2C8 321 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 CCDC177Q9NQR7 707 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 MGAT4AQ9UM21 535 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 KRT33AO76009 404 aa12.17□□□□□ -0.46
CLCN4-203ENST00000421085 EEFSECP57772 596 aaKnown RBP12.17□□□□□ -0.46
CLCN4-203ENST00000421085 RPS14P62263 151 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms