RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TIGD1Q96MW7 591 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 SIX2Q9NPC8 291 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 ADPRHL2Q9NX46 363 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 ARHGEF38Q9NXL2 777 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 ZNF148Q9UQR1 794 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 LOC102723996A0A087X1L8 192 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 OR6C76A6NM76 312 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 AHCYL1O43865 530 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 NADKO95544 446 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 NGFP01138 241 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 LIFP15018 202 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 GNB3P16520 340 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 ACTN2P35609 894 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 SNX16P57768 344 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 PLA2G7Q13093 441 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 WTAPQ15007 396 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 TMEM30BQ3MIR4 351 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 C14orf177Q52M58 125 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 MZT2BQ6NZ67 158 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 FIGLAQ6QHK4 219 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 FASTKD5Q7L8L6 764 aaKnown RBP4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 CEP57Q86XR8 500 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 FAM114A1Q8IWE2 563 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 CEP57L1Q8IYX8 460 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 C1orf131Q8NDD1 294 aaKnown RBP4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 SLC22A18Q96BI1 424 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 OR6C1Q96RD1 312 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 CDRT15Q96T59 188 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 OLFM1Q99784 485 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 RHNO1Q9BSD3 238 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 SPATC1LQ9H0A9 340 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 DPAGT1Q9H3H5 408 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 KCNK15Q9H427 330 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 CHMP1AQ9HD42 196 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 ACKR4Q9NPB9 350 aa4.06□□□□□ -1.76
HMGB1P49-201ENST00000418882 A0A087X002 238 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 ANKRD18BA2A2Z9 1011 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 SSX4O60224 188 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 OR10H2O60403 315 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 TOMM70O94826 608 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 H1F0P07305 194 aaKnown RBP4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 ALOX12P18054 663 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 ALDH4A1P30038 563 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 GABRA5P31644 462 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 MAP2K2P36507 400 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 B3GALT5-AS1P59052 145 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 LMOD3Q0VAK6 560 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 CHAF1BQ13112 559 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 GRAPQ13588 217 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 CUL4AQ13619 759 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 KRT33BQ14525 404 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 ASPRV1Q53RT3 343 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 IGSF11Q5DX21 431 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 CEP85LQ5SZL2 805 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 CORO6Q6QEF8 472 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 GPALPP1Q8IXQ4 340 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 SCML4Q8N228 414 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 FBXO39Q8N4B4 442 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 CPSF7Q8N684 471 aaKnown RBP4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 CNBD1Q8NA66 436 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 PTPMT1Q8WUK0 201 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 TMEM190Q8WZ59 177 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 MXD3Q9BW11 206 aa4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 RBM4Q9BWF3 364 aaKnown RBP4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 WBP11Q9Y2W2 641 aaKnown RBP4.05□□□□□ -1.76
HMGB1P49-201ENST00000418882 ELOVL7A1L3X0 281 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 A6NL46 340 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 XRCC3O43542 346 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 PCDH7O60245 1069 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 AVILO75366 819 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 CSPG5O95196 566 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 BCL10O95999 233 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 CHRNB4P30926 498 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 CDH11P55287 796 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 DMPKQ09013 629 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 EPS8Q12929 822 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 KRT79Q5XKE5 535 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 RPAP2Q8IXW5 612 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 GRHL3Q8TE85 626 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 CALML4Q96GE6 196 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 TRAF4Q9BUZ4 470 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 KIFC3Q9BVG8 833 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 VN1R1Q9GZP7 353 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 PDE7BQ9NP56 450 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 A4GALTQ9NPC4 353 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 OLFML3Q9NRN5 406 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 TUBE1Q9UJT0 475 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 C2CD2Q9Y426 696 aa4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P49-201ENST00000418882 A8MV72 311 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 E9PI62 339 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 DNM1LO00429 736 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 NAP1L1P55209 391 aaKnown RBP4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 SIRPAP78324 504 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 PPIGQ13427 754 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 KIAA1644Q3SXP7 199 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 RILPL1Q5EBL4 403 aa4.03□□□□□ -1.76
HMGB1P49-201ENST00000418882 DCAF10Q5QP82 559 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms