RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 IGHV5-51A0A0C4DH38 117 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 AP3B1O00203 1094 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 IFRD1O00458 451 aaPredicted RBP16.05■□□□□ 0.16
LINC00404-201ENST00000418660 GOT2P00505 430 aaKnown RBP16.05■□□□□ 0.16
LINC00404-201ENST00000418660 FTH1P02794 183 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 PRB1P04280 392 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 PDHA2P29803 388 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 SH3BP2P78314 561 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
LINC00404-201ENST00000418660 PCID2Q5JVF3 399 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 DNTTIP2Q5QJE6 756 aaKnown RBP16.05■□□□□ 0.16
LINC00404-201ENST00000418660 ARMC6Q6NXE6 501 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 CYB5D1Q6P9G0 228 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 CERS6Q6ZMG9 384 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 TIPARPQ7Z3E1 657 aaKnown RBP16.05■□□□□ 0.16
LINC00404-201ENST00000418660 KMT5CQ86Y97 462 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 PRELID2Q8N945 189 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 ACVR1CQ8NER5 493 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 OR4L1Q8NH43 312 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 SLC41A2Q96JW4 573 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 FERD3LQ96RJ6 166 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 PRSS21Q9Y6M0 314 aa16.05■□□□□ 0.16
LINC00404-201ENST00000418660 UBA6A0AVT1 1052 aaPredicted RBP16.04■□□□□ 0.16
LINC00404-201ENST00000418660 OR6C74A6NCV1 312 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 TLCD2A6NGC4 264 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 LIN7AO14910 233 aaPredicted RBP16.04■□□□□ 0.16
LINC00404-201ENST00000418660 DLGAP3O95886 979 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 ITGB2P05107 769 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 OR56A5P0C7T3 313 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 FGF5P12034 268 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 LIFP15018 202 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 PREPP48147 710 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 NPY2RP49146 381 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 SESN2P58004 480 aaPredicted RBP16.04■□□□□ 0.16
LINC00404-201ENST00000418660 PRAMEP78395 509 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 ABHD18Q0P651 414 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 COL9A2Q14055 689 aaPredicted RBP16.04■□□□□ 0.16
LINC00404-201ENST00000418660 MAP7Q14244 749 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 FASTKD1Q53R41 847 aaKnown RBP16.04■□□□□ 0.16
LINC00404-201ENST00000418660 ZNF534Q76KX8 674 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 CARFQ8N187 725 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 RASGEF1CQ8N431 466 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 SIDT2Q8NBJ9 832 aaKnown RBP16.04■□□□□ 0.16
LINC00404-201ENST00000418660 OR4E2Q8NGC2 313 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 OR6P1Q8NGX9 317 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 TFGQ92734 400 aaPredicted RBP16.04■□□□□ 0.16
LINC00404-201ENST00000418660 PBKQ96KB5 322 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 MAP3K3Q99759 626 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 SLC12A9Q9BXP2 914 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 MVB12BQ9H7P6 319 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 CHRAC1Q9NRG0 131 aa16.04■□□□□ 0.16
LINC00404-201ENST00000418660 F8W8V4 182 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 C1QL1O75973 258 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 PPARGP37231 505 aaPredicted RBP16.03■□□□□ 0.16
LINC00404-201ENST00000418660 CDK16Q00536 496 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 C19orf57Q0VDD7 668 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 PRKAA1Q13131 559 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 BOP1Q14137 746 aaKnown RBP16.03■□□□□ 0.16
LINC00404-201ENST00000418660 ESX1Q8N693 406 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 PHC3Q8NDX5 983 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 LCN9Q8WX39 176 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 ELMO1Q92556 727 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 KIAA1143Q96AT1 154 aaPredicted RBP16.03■□□□□ 0.16
LINC00404-201ENST00000418660 EFHD1Q9BUP0 239 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 ULBP3Q9BZM4 244 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 IL22Q9GZX6 179 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 SRMSQ9H3Y6 488 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 TFB2MQ9H5Q4 396 aaKnown RBP16.03■□□□□ 0.16
LINC00404-201ENST00000418660 PDE7BQ9NP56 450 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 BFARQ9NZS9 450 aa16.03■□□□□ 0.16
LINC00404-201ENST00000418660 LOC101059948A0A1B0GTJ6 334 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 GOLGA6L3A6NEY3 463 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 MATN2O00339 956 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 ZSCAN12O43309 604 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 OR1I1O60431 355 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 SPAG6O75602 509 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 ZNF28P17035 718 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 POLR2CP19387 275 aaPredicted RBP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 TPSB2P20231 275 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 ARCN1P48444 511 aaKnown RBP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 ARL4DP49703 201 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 CYP4F2P78329 520 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 HSD11B2P80365 405 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 PLOD1Q02809 727 aaPredicted RBP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 ACY1Q03154 408 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 LY6DQ14210 128 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 SEMA3AQ14563 771 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 TPSAB1Q15661 275 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 AARS2Q5JTZ9 985 aaKnown RBP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 BPHLQ86WA6 291 aaPredicted RBP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 PPP1R3BQ86XI6 285 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 RASGRP3Q8IV61 690 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 REXO1L1PQ8IX06 675 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 ELMO2Q96JJ3 720 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 FCRL4Q96PJ5 515 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 GPN2Q9H9Y4 310 aaPredicted RBP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 ANAPC5Q9UJX4 755 aa16.02■□□□□ 0.16
LINC00404-201ENST00000418660 TTC7AQ9ULT0 858 aaPredicted RBP16.02■□□□□ 0.16
LINC00404-201ENST00000418660 LOC400499M0QZD8 3231 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms