RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ZG16O60844 167 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CNOT3O75175 753 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 JRKO75564 520 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 PSMD10O75832 226 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ATP5HO75947 161 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 OXSR1O95747 527 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 PAHP00439 452 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 DNTTP04053 509 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 RHOXF2BP0C7M4 288 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 UBTFL6P0CB48 400 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ITIH1P19827 911 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 PRKCHP24723 683 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ANXA13P27216 316 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 GNA11P29992 359 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 YWHABP31946 246 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ARL2P36404 184 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 VHLP40337 213 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CENPAP49450 140 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 TUBP50607 506 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ITGA1P56199 1179 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ATP6V0D1P61421 351 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ZBTB16Q05516 673 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CDK18Q07002 472 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 PPP3CAQ08209 521 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 IMMTQ16891 758 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 LONRF1Q17RB8 773 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 NADK2Q4G0N4 442 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 HSP90AA5PQ58FG0 334 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ODF2Q5BJF6 829 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 TTMPQ5BVD1 217 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 XKR9Q5GH70 373 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ARTNQ5T4W7 220 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 AGBL2Q5U5Z8 902 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 METTL11BQ5VVY1 283 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 METTL21CQ5VZV1 264 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 SPECC1LQ69YQ0 1117 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 RWDD4Q6NW29 188 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CORO6Q6QEF8 472 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 USP51Q70EK9 711 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 B3GNT8Q7Z7M8 397 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 IQCHQ86VS3 1027 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 SFR1Q86XK3 245 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 TMEM25Q86YD3 366 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 PHC2Q8IXK0 858 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ST13P4Q8IZP2 240 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 BCL6BQ8N143 479 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 TMCO5AQ8N6Q1 288 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 STPG3Q8N7X2 389 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CCDC197Q8NCU1 140 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 OR5AN1Q8NGI8 311 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 UCMAQ8WVF2 138 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 RASSF5Q8WWW0 418 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 RUFY2Q8WXA3 655 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 GJA10Q969M2 543 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 C11orf24Q96F05 449 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 SLC45A3Q96JT2 553 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ATP6V1G3Q96LB4 118 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ZSCAN31Q96LW9 406 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 TMEM237Q96Q45 408 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 USP28Q96RU2 1077 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 OLFM1Q99784 485 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 RHOXF2Q9BQY4 288 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 INTS2Q9H0H0 1204 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 RAB17Q9H0T7 212 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 POLR3FQ9H1D9 316 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 SCPEP1Q9HB40 452 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CHST11Q9NPF2 352 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 DMRT3Q9NQL9 472 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CCDC177Q9NQR7 707 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CNGB3Q9NQW8 809 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 DIABLOQ9NR28 239 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 KCTD5Q9NXV2 234 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 SLC39A1Q9NY26 324 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 TAS2R7Q9NYW3 318 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 COPG2Q9UBF2 871 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 MTRF1LQ9UGC7 380 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 MAGEL2Q9UJ55 1249 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 MTMR6Q9Y217 621 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 KCTD3Q9Y597 815 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 PCDHGB6Q9Y5F9 930 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 HEY1Q9Y5J3 304 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ITIH6Q6UXX5 1313 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 SHANK1Q9Y566 2161 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 SMCO2A6NFE2 343 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 NEMP2A6NFY4 417 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TRIM64A6NGJ6 449 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TRIM64BA6NI03 449 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 SIGLEC16A6NMB1 481 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 K7ESM1 405 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 BET1O15155 118 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 PIAS2O75928 621 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 SEC24DO94855 1032 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CBX6O95503 412 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CCNB1P14635 433 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 TYRP14679 529 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 GSPT1P15170 499 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 PRLRP16471 622 aa5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 POLR2CP19387 275 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-206ENST00000417628 CRABP2P29373 138 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms