RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 SLC38A3Q99624 504 aa17.13■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 DPYSL5Q9BPU6 564 aa17.13■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CORO1CQ9ULV4 474 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 PSMD13Q9UNM6 376 aa17.13■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CDYLQ9Y232 598 aa17.13■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 COLEC10Q9Y6Z7 277 aa17.13■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 IGHV1OR21-1A0A087WYE8 117 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 MT-CO3P00414 261 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 APOA4P06727 396 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 SSTR1P30872 391 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 GPX6P59796 221 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 MPP1Q00013 466 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 FOXK2Q01167 660 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 GBX1Q14549 363 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CCDC157Q569K6 752 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 ZNF549Q6P9A3 640 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CNSTQ6PJW8 725 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 OTOAQ7RTW8 1153 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 PDZD3Q86UT5 571 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 TRIM48Q8IWZ4 208 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 LRRN4CLQ8ND94 238 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 SPDYE1Q8NFV5 336 aaPredicted RBP17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 IFT81Q8WYA0 676 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 C12orf66Q96MD2 445 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 FMO2Q99518 471 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 AARSD1Q9BTE6 412 aaKnown RBP17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CCDC68Q9H2F9 335 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 MVB12BQ9H7P6 319 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 LRRC4CQ9HCJ2 640 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 PPANQ9NQ55 473 aaKnown RBP17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 ZFATQ9P243 1243 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 MED16Q9Y2X0 877 aa17.12■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 TCRBV9S1A1TA0A576 114 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 C1QAP02745 245 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 RPLP0P05388 317 aaKnown RBP17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CHRM3P20309 590 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CD1CP29017 333 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 ALDH4A1P30038 563 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 ATP5DP30049 168 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 PREPP48147 710 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 OR1D5P58170 312 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 BOP1Q14137 746 aaKnown RBP17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 TMED2Q15363 201 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 SYTL3Q4VX76 610 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 HES3Q5TGS1 186 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CCDC25Q86WR0 208 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 Q8N9G6 341 aaPredicted RBP17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 TFGQ92734 400 aaPredicted RBP17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CDKL2Q92772 493 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 C9orf72Q96LT7 481 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 GFM1Q96RP9 751 aaKnown RBP17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 KCNK4Q9NYG8 393 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 FAM8A1Q9UBU6 413 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CLCA2Q9UQC9 943 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 NEUROG3Q9Y4Z2 214 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 KNTC1P50748 2209 aa17.11■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 FAM159BA6NKW6 160 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 TMX2-CTNND1H3BSU7 103 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 NIPSNAP2O75323 286 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CPNE6O95741 557 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 RHOXF2BP0C7M4 288 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 ITGB6P18564 788 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 SKIV2L2P42285 1042 aaKnown RBP17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CLCN7P51798 805 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 HSPA14Q0VDF9 509 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 FOXC1Q12948 553 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 SPIDRQ14159 915 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 RBM44Q6ZP01 1051 aaKnown RBP17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 OR10G6Q8NH81 332 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 DEPDC7Q96QD5 511 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 RHOXF2Q9BQY4 288 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 MCMBPQ9BTE3 642 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 FUT8Q9BYC5 575 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 KIR3DX1Q9H7L2 352 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 IMP3Q9NV31 184 aaKnown RBP17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 PDP2Q9P2J9 529 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 DHRS7Q9Y394 339 aa17.1■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 MED19A0JLT2 244 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 D6RAR5 112 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 E5RI56 91 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 EIF3FO00303 357 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 HYAL3O43820 417 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 JUPP14923 745 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 STX2P32856 288 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 ZFP36L1Q07352 338 aaKnown RBP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 GPR18Q14330 331 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 SLMAPQ14BN4 828 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 UGT3A1Q6NUS8 523 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 WDR74Q6RFH5 385 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 NAPRTQ6XQN6 538 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 CCNI2Q6ZMN8 369 aaPredicted RBP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 NEK10Q6ZWH5 1172 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 PIM3Q86V86 326 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 TBC1D21Q8IYX1 336 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 ZBTB2Q8N680 514 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 RAB33BQ9H082 229 aa17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 TFB2MQ9H5Q4 396 aaKnown RBP17.09■□□□□ 0.33
COMMD3-BMI1-201ENST00000417470 SMYD2Q9NRG4 433 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms