RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 EVA1BQ9NVM1 165 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 PIH1D1Q9NWS0 290 aaKnown RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 MRPL42Q9Y6G3 142 aaKnown RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 AP3D1O14617 1153 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 CFLARO15519 480 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 TADA2AO75478 443 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 CLIC3O95833 236 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 PGRP06401 933 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 TNNI3P19429 210 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 GNA15P30679 374 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 ARCN1P48444 511 aaKnown RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 OFCC1Q8IZS5 231 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 CBR4Q8N4T8 237 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 UTP15Q8TED0 518 aaKnown RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 ASB12Q8WXK4 309 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 PCDHB18PQ96TA0 734 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 RANGRFQ9HD47 186 aaPredicted RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 ITM2CQ9NQX7 267 aa20.09■□□□□ 0.81
AP1S3-205ENST00000415298 TSR3Q9UJK0 312 aaKnown RBP20.09■□□□□ 0.81
AP1S3-205ENST00000415298 PIAS1O75925 651 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 AKR1D1P51857 326 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 AIF1P55008 147 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 ERVK-8P63133 956 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 TNK1Q13470 666 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 FUT11Q495W5 492 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 GPAT3Q53EU6 434 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 SPOUT1Q5T280 376 aaKnown RBP20.08■□□□□ 0.81
AP1S3-205ENST00000415298 TMEM236Q5W0B7 351 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 FAM109BQ6ICB4 259 aaPredicted RBP20.08■□□□□ 0.81
AP1S3-205ENST00000415298 KDM1BQ8NB78 822 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 PPWD1Q96BP3 646 aaKnown RBP20.08■□□□□ 0.81
AP1S3-205ENST00000415298 MAGEB10Q96LZ2 347 aaPredicted RBP20.08■□□□□ 0.81
AP1S3-205ENST00000415298 LENG8Q96PV6 779 aaPredicted RBP20.08■□□□□ 0.81
AP1S3-205ENST00000415298 AGPAT1Q99943 283 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 POLE3Q9NRF9 147 aa20.08■□□□□ 0.81
AP1S3-205ENST00000415298 GRXCR1A8MXD5 290 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 GABARAPO95166 117 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 GPR50Q13585 617 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 KIAA0319Q5VV43 1072 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 HTR3DQ70Z44 454 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 TAS1R1Q7RTX1 841 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 POLNQ7Z5Q5 900 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 OR4D10Q8NGI6 311 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 SVIPQ8NHG7 77 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 DYNC2LI1Q8TCX1 351 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 ZNF606Q8WXB4 792 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 SLCO4A1Q96BD0 722 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 ASB9Q96DX5 294 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 TMEM176AQ96HP8 235 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 ING3Q9NXR8 418 aa20.08■□□□□ 0.8
AP1S3-205ENST00000415298 LCHNA4D1U4 455 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 AXIN1O15169 862 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 CD19P15391 556 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 CAPGP40121 348 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 RABGGTBP53611 331 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 FMO1Q01740 532 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 SEMA3BQ13214 749 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 SHHQ15465 462 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 CPNE8Q86YQ8 564 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 TOP6BLQ8N6T0 577 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 NDNFQ8TB73 568 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 NELL1Q92832 810 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 MARK4Q96L34 752 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 FYTTD1Q96QD9 318 aaKnown RBP20.07■□□□□ 0.8
AP1S3-205ENST00000415298 COA4Q9NYJ1 87 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 TLK1Q9UKI8 766 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 ADAM28Q9UKQ2 775 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 CNOT6Q9ULM6 557 aaKnown RBP20.07■□□□□ 0.8
AP1S3-205ENST00000415298 ANKRD6Q9Y2G4 727 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 CHD9Q3L8U1 2897 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 PSIP1O75475 530 aaKnown RBP20.07■□□□□ 0.8
AP1S3-205ENST00000415298 FTLP02792 175 aaPredicted RBP20.07■□□□□ 0.8
AP1S3-205ENST00000415298 KRT1P04264 644 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 BPGMP07738 259 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 MAVSQ7Z434 540 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 NKAIN4Q8IVV8 208 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 SLC7A6Q92536 515 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 OR52B2Q96RD2 323 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 CD274Q9NZQ7 290 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.07■□□□□ 0.8
AP1S3-205ENST00000415298 SCML1Q9UN30 329 aa20.07■□□□□ 0.8
AP1S3-205ENST00000415298 COPG1Q9Y678 874 aaKnown RBP20.07■□□□□ 0.8
AP1S3-205ENST00000415298 M0QZQ0 153 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 TRIM38O00635 465 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 XYLBO75191 536 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 MYOGP15173 224 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 RECQLP46063 649 aaPredicted RBP20.06■□□□□ 0.8
AP1S3-205ENST00000415298 ARFIP1P53367 373 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 ERVFC1P60507 584 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 EFR3AQ14156 821 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 STARD3Q14849 445 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 IRAK1BP1Q5VVH5 260 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 C16orf62Q7Z3J2 963 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 SPRED2Q7Z698 418 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.06■□□□□ 0.8
AP1S3-205ENST00000415298 SUSD3Q96L08 255 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 NT5C1AQ9BXI3 368 aa20.06■□□□□ 0.8
AP1S3-205ENST00000415298 REXO4Q9GZR2 422 aaKnown RBP20.06■□□□□ 0.8
AP1S3-205ENST00000415298 RANBP3Q9H6Z4 567 aaPredicted RBP20.06■□□□□ 0.8
AP1S3-205ENST00000415298 FAM49BQ9NUQ9 324 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms