RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 TRIM16O95361 564 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 FAM153BP0C7A2 387 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 MTHFD1P11586 935 aaKnown RBP11.65□□□□□ -0.54
ATG4B-207ENST00000415107 FDXRP22570 491 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 SLC19A1P41440 591 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 LIMK2P53671 638 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 VSNL1P62760 191 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 GPLD1P80108 840 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 DAB2P98082 770 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 TIAL1Q01085 375 aaKnown RBP eCLIP11.65□□□□□ -0.544e-6■■□□□ 12.4
ATG4B-207ENST00000415107 E2F1Q01094 437 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 HHEXQ03014 270 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 RPE65Q16518 533 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 ERCC6LQ2NKX8 1250 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 KLHL38Q2WGJ6 581 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 TTLL9Q3SXZ7 439 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 FAM153CQ494X1 144 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 GRTP1Q5TC63 336 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 STRA8Q7Z7C7 330 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 RASGRP3Q8IV61 690 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 ZBTB2Q8N680 514 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 LILRA3Q8N6C8 439 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-207ENST00000415107 CD200R1Q8TD46 325 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 NAT14Q8WUY8 206 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 VPS39Q96JC1 886 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 GPR22Q99680 433 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 TWSG1Q9GZX9 223 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 EPB41L4BQ9H329 900 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 MVB12BQ9H7P6 319 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 TAS2R13Q9NYV9 303 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-207ENST00000415107 ZNF180Q9UJW8 692 aa11.65□□□□□ -0.54
ATG4B-207ENST00000415107 APOBEC2Q9Y235 224 aaKnown RBP11.65□□□□□ -0.54
ATG4B-207ENST00000415107 CNOT1A5YKK6 2376 aaKnown RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 COL27A1Q8IZC6 1860 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 FAM221BA6H8Z2 402 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 IQCF5A8MTL0 148 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 CXorf49A8MYA2 514 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 NTN3O00634 580 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SNX2O60749 519 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 TCEA3O75764 348 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 WISP3O95389 354 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 MATN4O95460 622 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 ACSL3O95573 720 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 FTH1P19P0C7X4 201 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 CHRM3P20309 590 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 RPL10P27635 214 aaKnown RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 PDHA2P29803 388 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 PBLDP30039 288 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SPRP35270 261 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 ID4P47928 161 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 CSRP3P50461 194 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 PMS2P54278 862 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 MAZP56270 477 aaKnown RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 POU4F1Q01851 419 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 BOP1Q14137 746 aaKnown RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 TCEA2Q15560 299 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SMAD1Q15797 465 aaKnown RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SYTL3Q4VX76 610 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 HECTD2Q5U5R9 776 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 UNC5DQ6UXZ4 953 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 TMEM26Q6ZUK4 368 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SPRED1Q7Z699 444 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 CCDC91Q7Z6B0 441 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SFTPA2Q8IWL1 248 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 KRT222Q8N1A0 295 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 IFI44Q8TCB0 444 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 AENQ8WTP8 325 aaKnown RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SLC44A1Q8WWI5 657 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 PATE1Q8WXA2 126 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 ADAMTS14Q8WXS8 1223 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 ANKRD7Q92527 254 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 INPP5DQ92835 1189 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 CAVIN3Q969G5 261 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 ISL2Q96A47 359 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 INSM2Q96T92 566 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-207ENST00000415107 DPYSL5Q9BPU6 564 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 DHRS4Q9BTZ2 278 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 WWP1Q9H0M0 922 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 KIR3DX1Q9H7L2 352 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 PPCSQ9HAB8 311 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SIRPGQ9P1W8 387 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 TXNDC16Q9P2K2 825 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 SLC17A6Q9P2U8 582 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 LRIT1Q9P2V4 623 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 VWA7Q9Y334 891 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 RNF215Q9Y6U7 377 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 COLEC10Q9Y6Z7 277 aa11.64□□□□□ -0.55
ATG4B-207ENST00000415107 FAM95CA0A1B0GW59 222 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 OR52A4PA6NMU1 304 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 PPM1DO15297 605 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 VIPP01282 170 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 RPN2P04844 631 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 MPC1LP0DKB6 136 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 CNTFP26441 200 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms