RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 H3BM21 787 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 C8GP07360 202 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 SBK3P0C264 359 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 ACP5P13686 325 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 NME1P15531 152 aaKnown RBP13.95□□□□□ -0.18
SF3B1-204ENST00000414963 ACADLP28330 430 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 PDHA2P29803 388 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 PBLDP30039 288 aaPredicted RBP13.95□□□□□ -0.18
SF3B1-204ENST00000414963 PREPP48147 710 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 KCNC1P48547 511 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 CSNK1EP49674 416 aaKnown RBP13.95□□□□□ -0.18
SF3B1-204ENST00000414963 C21orf59P57076 290 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 WDR4P57081 412 aaKnown RBP13.95□□□□□ -0.18
SF3B1-204ENST00000414963 PLA2G4EQ3MJ16 856 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 C16orf46Q6P387 395 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 RABEPKQ7Z6M1 372 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 HID1Q8IV36 788 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 MDM1Q8TC05 714 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 FAM111AQ96PZ2 611 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 SLC12A9Q9BXP2 914 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 TMEM168Q9H0V1 697 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 TMEM74BQ9NUR3 256 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 OGFRQ9NZT2 677 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 KLF15Q9UIH9 416 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 PCOLCE2Q9UKZ9 415 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 PLEKHM1Q9Y4G2 1056 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 ST14Q9Y5Y6 855 aa13.95□□□□□ -0.18
SF3B1-204ENST00000414963 CDC7O00311 574 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 BTN3A1O00481 513 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 KERAO60938 352 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 PSIP1O75475 530 aaKnown RBP13.94□□□□□ -0.18
SF3B1-204ENST00000414963 IDSP22304 550 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 CTSKP43235 329 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 GLRBP48167 497 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 CTBSQ01459 385 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 SP140Q13342 867 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 OR4D1Q15615 310 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 TSNQ15631 228 aaKnown RBP13.94□□□□□ -0.18
SF3B1-204ENST00000414963 SEPT7Q16181 437 aaKnown RBP13.94□□□□□ -0.18
SF3B1-204ENST00000414963 PPP1R3AQ16821 1122 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 CDKL4Q5MAI5 379 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 CAPRIN2Q6IMN6 1127 aaKnown RBP13.94□□□□□ -0.18
SF3B1-204ENST00000414963 SBSNQ6UWP8 590 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 ABRAXAS1Q6UWZ7 409 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 LAYNQ6UX15 382 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 RD3Q7Z3Z2 195 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 ADAMTSL2Q86TH1 951 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 PDZD3Q86UT5 571 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 NRROSQ86YC3 692 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 PHACTR4Q8IZ21 702 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 SDR16C5Q8N3Y7 309 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 FBXO15Q8NCQ5 510 aaPredicted RBP13.94□□□□□ -0.18
SF3B1-204ENST00000414963 ARMC2Q8NEN0 867 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 CEP76Q8TAP6 659 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 SCYL1Q96KG9 808 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
SF3B1-204ENST00000414963 RDH14Q9HBH5 336 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 XPR1Q9UBH6 696 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 MID2Q9UJV3 735 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 CEP192Q8TEP8 1941 aa13.94□□□□□ -0.18
SF3B1-204ENST00000414963 THADAQ6YHU6 1953 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 NPEPPSL1A6NEC2 478 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 SYCE1LA8MT33 242 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 G3V2L1 256 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 BIRC5O15392 142 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 ENO2P09104 434 aaPredicted RBP13.93□□□□□ -0.18
SF3B1-204ENST00000414963 CPA3P15088 417 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 CHN1P15882 459 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 JUNDP17535 347 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 RXRGP48443 463 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 SERPINB4P48594 390 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 BNC1Q01954 994 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 ILF3Q12906 894 aaKnown RBP eCLIP13.93□□□□□ -0.18
SF3B1-204ENST00000414963 DUOXA1Q1HG43 343 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 UNC5DQ6UXZ4 953 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 ZYG11AQ6WRX3 759 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 GPSM1Q86YR5 675 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 PIGKQ92643 395 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 DLG3Q92796 817 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 PRRX2Q99811 253 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 GSDMCQ9BYG8 508 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 UNKQ9C0B0 810 aaKnown RBP13.93□□□□□ -0.18
SF3B1-204ENST00000414963 ZDHHC5Q9C0B5 715 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 TCEAL2Q9H3H9 227 aaPredicted RBP13.93□□□□□ -0.18
SF3B1-204ENST00000414963 PARVBQ9HBI1 364 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 DNAJC28Q9NX36 388 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 COPG2Q9UBF2 871 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 FAM8A1Q9UBU6 413 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 TMCO1Q9UM00 188 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 KCNK6Q9Y257 313 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 DNAJC16Q9Y2G8 782 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 OARD1Q9Y530 152 aa13.93□□□□□ -0.18
SF3B1-204ENST00000414963 GON4LQ3T8J9 2241 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 ZNF318Q5VUA4 2279 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 A0A1B0GVT2 93 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 A6NCN8 305 aa13.92□□□□□ -0.18
SF3B1-204ENST00000414963 TK2O00142 265 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms