RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 C4orf22Q6V702 233 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 C15orf39Q6ZRI6 1047 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 RBPMS2Q6ZRY4 209 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TRILQ7L0X0 811 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 LRRC8DQ7L1W4 858 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 KCTD9Q7L273 389 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SPATA19Q7Z5L4 167 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 B3GNT8Q7Z7M8 397 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ADAMTSL2Q86TH1 951 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ITIH5Q86UX2 942 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 IQCHQ86VS3 1027 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PLCZ1Q86YW0 608 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 HIPK1Q86Z02 1210 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GID4Q8IVV7 300 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 FOXRED2Q8IWF2 684 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CHERPQ8IWX8 916 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NELFCDQ8IXH7 590 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 KATNAL2Q8IYT4 538 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ENTHD1Q8IYW4 607 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MCOLN2Q8IZK6 566 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 FBXL16Q8N461 479 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 FSTL5Q8N475 847 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 POC5Q8NA72 575 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GLIS1Q8NBF1 620 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PPFIBP2Q8ND30 876 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 OR1N1Q8NGS0 311 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 OR6Y1Q8NGX8 325 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NCOA7Q8NI08 942 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PLEKHO2Q8TD55 490 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TGFBRAP1Q8WUH2 860 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CKAP2Q8WWK9 683 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PYDC1Q8WXC3 89 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 RLN3Q8WXF3 142 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ING5Q8WYH8 240 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 POMGNT1Q8WZA1 660 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CFHR4Q92496 578 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 GTF3AQ92664 365 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MYDGFQ969H8 173 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 KIAA1143Q96AT1 154 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 DUS3LQ96G46 650 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MMP19Q99542 508 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NDNQ99608 321 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MGME1Q9BQP7 344 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MXRA8Q9BRK3 442 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SLC25A23Q9BV35 468 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ANGPTL4Q9BY76 406 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 WDR11Q9BZH6 1224 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TINAGL1Q9GZM7 467 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 RACGAP1Q9H0H5 632 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 DNTTIP1Q9H147 329 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CDT1Q9H211 546 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 OR51B6Q9H340 312 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TAF1DQ9H5J8 278 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 AUNIPQ9H7T9 357 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 AGO3Q9H9G7 860 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NOD2Q9HC29 1040 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SMURF1Q9HCE7 757 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 CNNM1Q9NRU3 951 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF275Q9NSD4 429 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PNPLA3Q9NST1 481 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 C20orf96Q9NUD7 363 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TDP1Q9NUW8 608 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ARL8BQ9NVJ2 186 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 OXSMQ9NWU1 459 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SYBUQ9NX95 663 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ZDHHC7Q9NXF8 308 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MTMR4Q9NYA4 1195 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MPP6Q9NZW5 540 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SERGEFQ9UGK8 458 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 POLLQ9UGP5 575 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 LIMA1Q9UHB6 759 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SLC24A2Q9UI40 661 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TMEFF2Q9UIK5 374 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TRMT6Q9UJA5 497 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ENPP5Q9UJA9 477 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 FBXL7Q9UJT9 491 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 DBNLQ9UJU6 430 aaKnown RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 OSGIN1Q9UJX0 560 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 KCND3Q9UK17 655 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MAN1B1Q9UKM7 699 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 RAB23Q9ULC3 237 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 FAF1Q9UNN5 650 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PLCL2Q9UPR0 1127 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MFHAS1Q9Y4C4 1052 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 PCDHA9Q9Y5H5 950 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 SNX14Q9Y5W7 946 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 UBE4BO95155 1302 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 MN1Q10571 1320 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-203ENST00000414174 NPHP3Q7Z494 1330 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF521Q96K83 1311 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 KIF24Q5T7B8 1368 aa3.58□□□□□ -1.84
SF3B1-203ENST00000414174 TRBV2A0A0J9YWF9 115 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PNMA6EA0A0J9YXQ4 647 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 NPHP3-ACAD11A0A0J9YXS1 232 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 ELOVL7A1L3X0 281 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 OOEPA6NGQ2 149 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF233A6NK53 670 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms