RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 POP7O75817 140 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 FSBPO95073 299 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 SNUPNO95149 360 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 SIX3O95343 332 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 MATN4O95460 622 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 PDGFBP01127 241 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 S100BP04271 92 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 CEACAM5P06731 702 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 CHRNGP07510 517 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 DCNP07585 359 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 HOXC4P09017 264 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 TROVE2P10155 538 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS41-204ENST00000413141 VCLP18206 1134 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 IMPDH1P20839 514 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 MPSTP25325 297 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 EEF1DP29692 281 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 AKT2P31751 481 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 MAGEA9P43362 315 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 MAPK9P45984 424 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 CCR10P46092 362 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 PXNP49023 591 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 CCR3P51677 355 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 CLDN2P57739 230 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 PFN3P60673 137 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 ARHGAP8P85298 464 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 CDKL1Q00532 357 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 PLOD1Q02809 727 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 SIGLEC14Q08ET2 396 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 SF3A3Q12874 501 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS41-204ENST00000413141 NFE2L1Q14494 772 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 NFATC4Q14934 902 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 UNC50Q53HI1 259 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 ARL13AQ5H913 290 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 CFAP157Q5JU67 520 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 TPRG1LQ5T0D9 272 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 FAM83HQ6ZRV2 1179 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 UBE2R2Q712K3 238 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 RAB44Q7Z6P3 723 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 CRLF3Q8IUI8 442 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 CACNA2D3Q8IZS8 1091 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 LSMEM2Q8N112 164 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 CAMKK1Q8N5S9 505 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 FAM160A2Q8N612 972 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 FRMD1Q8N878 549 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 ZNF781Q8N8C0 355 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 PPP4R1Q8TF05 950 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 ZNF483Q8TF39 744 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 UBTD2Q8WUN7 234 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 SKA2Q8WVK7 121 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 C10orf82Q8WW14 230 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 RLN3Q8WXF3 142 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 ASB11Q8WXH4 323 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 BIRC7Q96CA5 298 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 MOCOSQ96EN8 888 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 THOC1Q96FV9 657 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 PDXPQ96GD0 296 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 SCARF2Q96GP6 870 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 SEC16BQ96JE7 1060 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 CNDP1Q96KN2 507 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 TMEM79Q9BSE2 394 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 TIMM29Q9BSF4 260 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 TRMOQ9BU70 441 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 GPR174Q9BXC1 333 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 C1QTNF3Q9BXJ4 246 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 SLC12A9Q9BXP2 914 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 TRIM55Q9BYV6 548 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 RMI1Q9H9A7 625 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 EBF2Q9HAK2 575 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 RDH14Q9HBH5 336 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 FGF22Q9HCT0 170 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 TM7SF3Q9NS93 570 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 UTP6Q9NYH9 597 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 CD274Q9NZQ7 290 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 DLGAP2Q9P1A6 1054 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 MARCOQ9UEW3 520 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 EIF2B4Q9UI10 523 aaKnown RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 HAO1Q9UJM8 370 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 PDE10AQ9Y233 779 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 DNAJC16Q9Y2G8 782 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 PRKAB1Q9Y478 270 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 ASB1Q9Y576 335 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 DNMT3AQ9Y6K1 912 aaPredicted RBP6.51□□□□□ -1.37
VPS41-204ENST00000413141 LRP4O75096 1905 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PRSS38A1L453 326 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PRR19A6NJB7 356 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 ARHGEF33A8MVX0 844 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PRAMEF26H0Y7S4 382 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 H3BM21 787 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 GFYI3L273 518 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 E2F3O00716 465 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 UBFD1O14562 309 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 TOR1BO14657 336 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 PSIP1O75475 530 aaKnown RBP6.5□□□□□ -1.37
VPS41-204ENST00000413141 SUPT7LO94864 414 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 GUCA1CO95843 209 aa6.5□□□□□ -1.37
VPS41-204ENST00000413141 FUCA1P04066 466 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms