RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ALKBH8Q96BT7 664 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SCARF2Q96GP6 870 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 AGAP2Q99490 1192 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SP110Q9HB58 689 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 MLXIPLQ9NP71 852 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 HAUS2Q9NVX0 235 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 AP4E1Q9UPM8 1137 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-205ENST00000409542 CAPN5O15484 640 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 ZW10O43264 779 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 BANF1O75531 89 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 STK17BO94768 372 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 ZWINTO95229 277 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 MAP3K6O95382 1288 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 PEX11BO96011 259 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 FURINP09958 794 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 FOXN2P32314 431 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 UQCRFS1P47985 274 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 AIF1P55008 147 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 RAB15P59190 212 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 ABHD18Q0P651 414 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 TRAF2Q12933 501 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 PDK4Q16654 411 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 PYCR3Q53H96 274 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 MARK2Q7KZI7 788 aaKnown RBP12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 TECPR1Q7Z6L1 1165 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 MZB1Q8WU39 189 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 DCAKDQ8WVC6 231 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 APOBEC4Q8WW27 367 aaKnown RBP12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 PSKH2Q96QS6 385 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 OR2M4Q96R27 311 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 CYTH2Q99418 400 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 PAFAH2Q99487 392 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 DHX35Q9H5Z1 703 aaKnown RBP12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 NOD2Q9HC29 1040 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 SLC40A1Q9NP59 571 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 TMEM184BQ9Y519 407 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 TEX264Q9Y6I9 313 aa12.52□□□□□ -0.41
CHRNA1-205ENST00000409542 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 CFAP73A6NFT4 308 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 SPAG7O75391 227 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 DLGAP3O95886 979 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 GSTA2P09210 222 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 ZNF28P17035 718 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 CTPS1P17812 591 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 SSTR1P30872 391 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 HNRNPH1P31943 449 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 MSH2P43246 934 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 FASLGP48023 281 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 MAXP61244 160 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 AP1S1P61966 158 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 GPLD1P80108 840 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 IL10RBQ08334 325 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 KLRB1Q12918 225 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 GALNTL6Q49A17 601 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 CGB2Q6NT52 195 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 CEACAM20Q6UY09 585 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 RFX8Q6ZV50 586 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 TMEM135Q86UB9 458 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 ZC3H18Q86VM9 953 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 SFRP1Q8N474 314 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 MCUQ8NE86 351 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 NCSTNQ92542 709 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 AHCYL2Q96HN2 611 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 TEFMQ96QE5 360 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 SLC38A3Q99624 504 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 ABCG8Q9H221 673 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 FBXO8Q9NRD0 319 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 RCOR3Q9P2K3 495 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 PRKAB1Q9Y478 270 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 KCNMB2Q9Y691 235 aa12.51□□□□□ -0.41
CHRNA1-205ENST00000409542 KCNN4O15554 427 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 FAM155BO75949 473 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 PDGFAP04085 211 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 TCN2P20062 427 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 CA4P22748 312 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 TEAD1P28347 426 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 HTR7P34969 479 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 ELK3P41970 407 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 STAT5AP42229 794 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 GPR1P46091 355 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 NR2C2P49116 596 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 PPM1FP49593 454 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 NFATC2Q13469 925 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 RFTN1Q14699 578 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 KDELC2Q7Z4H8 507 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 OR10G6Q8NH81 332 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 SCAMP4Q969E2 229 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 LRRC39Q96DD0 335 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 QKIQ96PU8 341 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 ABCF3Q9NUQ8 709 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 ETNK2Q9NVF9 386 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 KLHL3Q9UH77 587 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms