RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ALOX12BO75342 701 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 UMODP07911 640 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 ST6GAL1P15907 406 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 HLA-DPA1P20036 260 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 TDGF1P3P51864 188 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 KCNK10P57789 538 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 CYP2A13Q16696 494 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 BOLA3Q53S33 107 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 FKBP15Q5T1M5 1219 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 NCBP2-AS2Q69YL0 99 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 MRGPRGQ86SM5 289 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 CDH24Q86UP0 819 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF808Q8N4W9 903 aaPredicted RBP12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 NEK11Q8NG66 645 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 OR2Y1Q8NGV0 311 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 GDAP1Q8TB36 358 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 FATE1Q969F0 183 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 AGAP3Q96P47 875 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 C17orf62Q9BQA9 187 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 BPIFA3Q9BQP9 254 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 OLAHQ9NV23 265 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 HAUS2Q9NVX0 235 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 CACNA1CQ13936 2221 aa12.46□□□□□ -0.41
CHRNA1-203ENST00000409219 AGPSO00116 658 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 PRICKLE3O43900 615 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 ZNF500O60304 480 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 POP7O75817 140 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 CD48P09326 243 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 CCNCP24863 283 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 SLC9A5Q14940 896 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 IFI16Q16666 785 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 VWA2Q5GFL6 755 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 ZFYVE27Q5T4F4 411 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 FCRL6Q6DN72 434 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 PPP1R2P3Q6NXS1 205 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 SARM1Q6SZW1 724 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 RASGEF1AQ8N9B8 481 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 TEKT4Q8WW24 435 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 C12orf66Q96MD2 445 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 TTC25Q96NG3 672 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 TSGA13Q96PP4 275 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 NAT10Q9H0A0 1025 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 WWP1Q9H0M0 922 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 MAGEE1Q9HCI5 957 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 SLC6A20Q9NP91 592 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 SERTAD3Q9UJW9 196 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 CDYLQ9Y232 598 aa12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 NCOA6Q14686 2063 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-203ENST00000409219 ANKHD1Q8IWZ3 2542 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 OR2AG2A6NM03 316 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 AURKAO14965 403 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 GPR39O43194 453 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 TPM3P06753 285 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 HBQ1P09105 142 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 MSNP26038 577 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 PBLDP30039 288 aaPredicted RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 SLC25A11Q02978 314 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 PRKAA1Q13131 559 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 PAFAH1B3Q15102 231 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 TLR1Q15399 786 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 FAM182AQ5T1J6 154 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 C1orf189Q5VU69 101 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 METRNLQ641Q3 311 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 ZNF324BQ6AW86 544 aaPredicted RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 CDHR3Q6ZTQ4 885 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 BCORP1Q8N888 145 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 PTERQ96BW5 349 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 PITPNM3Q9BZ71 974 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 KLHL25Q9H0H3 589 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 BPIFA1Q9NP55 256 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 SUCOQ9UBS9 1254 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 GPN3Q9UHW5 284 aaPredicted RBP12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
CHRNA1-203ENST00000409219 H3BMH7 237 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 MATN2O00339 956 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 PCDH17O14917 1159 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 PTMAP06454 111 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 PVRP15151 417 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 FERP16591 822 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 HOXB4P17483 251 aaPredicted RBP12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 PRDX3P30048 256 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 SSTR2P30874 369 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 CCDC122Q5T0U0 273 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 AGAP7PQ5VUJ5 663 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 CDKAL1Q5VV42 579 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 PRAMEF13Q5VWM6 474 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 RHBDD2Q6NTF9 364 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 MRPL14Q6P1L8 145 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 TMEM220Q6QAJ8 160 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 BEND7Q8N7W2 519 aaPredicted RBP12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 CNTD1Q8N815 330 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 OR4E2Q8NGC2 313 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 BRSK1Q8TDC3 778 aa12.44□□□□□ -0.42
CHRNA1-203ENST00000409219 ZFPM2Q8WW38 1151 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms