RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 ZDHHC20Q5W0Z9 365 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 KANK2Q63ZY3 851 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 NAIF1Q69YI7 327 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 GTF2H2CQ6P1K8 395 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 LAYNQ6UX15 382 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 XKR5Q6UX68 686 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 C16orf89Q6UX73 402 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SERPINA13PQ6UXR4 307 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MBOAT1Q6ZNC8 495 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SFTPA1Q8IWL2 248 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 METTL6Q8TCB7 284 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SLC26A7Q8TE54 656 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PYDC1Q8WXC3 89 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 DCUN1D1Q96GG9 259 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SAMD11Q96NU1 681 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 HBEGFQ99075 208 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 RIOK2Q9BVS4 552 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 C1QTNF3Q9BXJ4 246 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PBX4Q9BYU1 374 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 NKX2-4Q9H2Z4 354 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 IPPKQ9H8X2 491 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 EBF2Q9HAK2 575 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 KCTD5Q9NXV2 234 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 WWOXQ9NZC7 414 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 POLG2Q9UHN1 485 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SARDHQ9UL12 918 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ITM2BQ9Y287 266 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ANGPTL3Q9Y5C1 460 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TNPO3Q9Y5L0 923 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TBC1D3BA6NDS4 549 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ANTXRLA6NF34 631 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 OR2AG2A6NM03 316 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 HOXC11O43248 304 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ASLP04424 464 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 CAPN1P07384 714 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SRPRAP08240 638 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SNRPB2P08579 225 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ATP1B2P14415 290 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ZNF30P17039 623 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 VCLP18206 1134 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TCN1P20061 433 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 NFKBIAP25963 317 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MAGEA10P43363 369 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 METAP1P53582 386 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ATXN3P54252 364 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 DIO3P55073 304 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MTTPP55157 894 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SLC34A1Q06495 639 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 GRIN2CQ14957 1233 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ACOX1Q15067 660 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MAPRE2Q15555 327 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 WLSQ5T9L3 541 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TANGO2Q6ICL3 276 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 LETMD1Q6P1Q0 360 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 BNC2Q6ZN30 1099 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PARS2Q7L3T8 475 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ARMCX6Q7L4S7 300 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 GOLGA7Q7Z5G4 137 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MYLK4Q86YV6 388 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 BEND7Q8N7W2 519 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 WFIKKN2Q8TEU8 576 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ULK4Q96C45 1275 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SLC45A3Q96JT2 553 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SERPINI1Q99574 410 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 WRAP53Q9BUR4 548 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SFXN1Q9H9B4 322 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ADA2Q9NZK5 511 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 STX18Q9P2W9 335 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TMCO1Q9UM00 188 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 C15orf41Q9Y2V0 281 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 OARD1Q9Y530 152 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ALPK3Q96L96 1907 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 EPOPA6NHQ4 379 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 PLK4O00444 970 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 INPP4BO15327 924 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 TAPBPO15533 448 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 NRP2O60462 931 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 ELFN1P0C7U0 828 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 MSH3P20585 1137 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 DPP6P42658 865 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 PIK3CGP48736 1102 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 HTR6P50406 440 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 CCNG1P51959 295 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 THOP1P52888 689 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 NAA20P61599 178 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 AP2B1P63010 937 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 PTK2BQ14289 1009 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 PCBP2Q15366 365 aaKnown RBP eCLIP3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 CRY1Q16526 586 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 ZNF284Q2VY69 593 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 ERAP2Q6P179 960 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 IL27RAQ6UWB1 636 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 LIPIQ6XZB0 460 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 MILR1Q7Z6M3 343 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 VRK3Q8IV63 474 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 FUNDC1Q8IVP5 155 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 ETFBKMTQ8IXQ9 262 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 CCDC116Q8IYX3 515 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 PGAM4Q8N0Y7 254 aa3.9□□□□□ -1.78
LRRTM4-201ENST00000409088 MIER2Q8N344 545 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms