RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 SKA1Q96BD8 255 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 SGF29Q96ES7 293 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 SIPA1Q96FS4 1042 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 SHDQ96IW2 340 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 MAGEB10Q96LZ2 347 aaPredicted RBP9.62□□□□□ -0.87
POLR1A-202ENST00000409024 RMDN2Q96LZ7 410 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 LENG8Q96PV6 779 aaPredicted RBP9.62□□□□□ -0.87
POLR1A-202ENST00000409024 NELL2Q99435 816 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 TEX101Q9BY14 249 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 MYLK2Q9H1R3 596 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 ZNF395Q9H8N7 513 aaPredicted RBP9.62□□□□□ -0.87
POLR1A-202ENST00000409024 RMI1Q9H9A7 625 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 COG4Q9H9E3 785 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 TXLNGQ9NUQ3 528 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 PNPOQ9NVS9 261 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 CD274Q9NZQ7 290 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 HEY2Q9UBP5 337 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 ZFP69BQ9UJL9 534 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 PTBP2Q9UKA9 531 aaKnown RBP9.62□□□□□ -0.87
POLR1A-202ENST00000409024 DUSP12Q9UNI6 340 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 PLXNB3Q9ULL4 1909 aa9.62□□□□□ -0.87
POLR1A-202ENST00000409024 A0A1W2PP55 124 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 SLC5A10A0PJK1 596 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 NEMP2A6NFY4 417 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 IGLON5A6NGN9 336 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 VPS4BO75351 444 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 CDK14O94921 469 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 PCDH8O95206 1070 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 MATN4O95460 622 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ANXA5P08758 320 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 HIST1H2AGP0C0S8 130 aaPredicted RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 KITP10721 976 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ACADMP11310 421 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 HIST1H2ADP20671 130 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 CYP2A7P20853 494 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 SDHBP21912 280 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 EEF1DP29692 281 aaKnown RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 NUDT1P36639 197 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 IDH3AP50213 366 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 INHBCP55103 352 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 CLCQ05315 142 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 LCP2Q13094 533 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 RPA4Q13156 261 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 MLF2Q15773 248 aaPredicted RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 RSPO4Q2I0M5 234 aaPredicted RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 TMEM259Q4ZIN3 620 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 TMEM220Q6QAJ8 160 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 RNF165Q6ZSG1 346 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ACAD11Q709F0 780 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ADGRG6Q86SQ4 1221 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 CUZD1Q86UP6 607 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 HORMAD1Q86X24 394 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 RASGEF1AQ8N9B8 481 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 DENND6BQ8NEG7 585 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 FLCNQ8NFG4 579 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 LKAAEAR1Q8TD35 194 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 MCOLN3Q8TDD5 553 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ATL1Q8WXF7 558 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ELMO1Q92556 727 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 TMEM159Q96B96 161 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 FAM136AQ96C01 138 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 MAELQ96JY0 434 aaKnown RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 HIST1H2AHQ96KK5 128 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 RILPQ96NA2 401 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 FOPNLQ96NB1 174 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 HIST1H2AJQ99878 128 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 H2AFJQ9BTM1 129 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 NUSAP1Q9BXS6 441 aaKnown RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 UNKQ9C0B0 810 aaKnown RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 MKRN2Q9H000 416 aaKnown RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 DPEP2Q9H4A9 486 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 SGK2Q9HBY8 427 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 CYP4F12Q9HCS2 524 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 POLMQ9NP87 494 aaPredicted RBP9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ABCF3Q9NUQ8 709 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 WNT16Q9UBV4 365 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 ZDHHC2Q9UIJ5 367 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 SLC12A4Q9UP95 1085 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 TRAF6Q9Y4K3 522 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 GPR179Q6PRD1 2367 aa9.61□□□□□ -0.87
POLR1A-202ENST00000409024 MGAT4DA6NG13 374 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 GIPC1O14908 333 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 CHUKO15111 745 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 GRID2O43424 1007 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 LILRB5O75023 590 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 KATNA1O75449 491 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 IGLV3-19P01714 112 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 CHRNGP07510 517 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 PCSK2P16519 638 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 ITGB6P18564 788 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 AOC1P19801 751 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 MPSTP25325 297 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 PRDX6P30041 224 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 RPIAP49247 311 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 DGKEP52429 567 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 HK3P52790 923 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 ADPRHP54922 357 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 HSPA14Q0VDF9 509 aa9.6□□□□□ -0.87
POLR1A-202ENST00000409024 WSCD2Q2TBF2 565 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms