RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 CDADC1Q9BWV3 514 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 B3GNT5Q9BYG0 378 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 DMAC2Q9NW81 257 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 CPA4Q9UI42 421 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 PCDHGA11Q9Y5H2 935 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 NID2Q14112 1375 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 FOXO6A8MYZ6 492 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 CLDN5O00501 218 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 CD2P06729 351 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 IMPDH1P20839 514 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 HSPA7P48741 367 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 PRR5P85299 388 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 PCDH1Q08174 1060 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 BNIP3Q12983 259 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ZNF234Q14588 700 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 HEPACAMQ14CZ8 416 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 UGCGQ16739 394 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 TPRG1LQ5T0D9 272 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 FRRS1Q6ZNA5 592 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 NATD1Q8N6N6 113 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SLC35B2Q8TB61 432 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 DCAKDQ8WVC6 231 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 MAP4K5Q9Y4K4 846 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 PCDHGB1Q9Y5G3 927 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SCAMP3O14828 347 aaKnown RBP12.79□□□□□ -0.36
RNF43-201ENST00000407977 TP73O15350 636 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 DNAJB5O75953 348 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 SNHG28P0DPA3 235 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ARF4P18085 180 aaPredicted RBP12.79□□□□□ -0.36
RNF43-201ENST00000407977 ATXN7L2Q5T6C5 722 aaPredicted RBP12.79□□□□□ -0.36
RNF43-201ENST00000407977 NAT8LQ8N9F0 302 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 STON2Q8WXE9 905 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 FATE1Q969F0 183 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 FERD3LQ96RJ6 166 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ASAH2Q9NR71 780 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 ZIM2Q9NZV7 527 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 NR2E1Q9Y466 385 aa12.79□□□□□ -0.36
RNF43-201ENST00000407977 hCG_2039718K7EN88 272 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 B4GALT5O43286 388 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 GIMD1P0DJR0 217 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 TAS2R39P59534 338 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 RHDQ02161 417 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 FAM174BQ3ZCQ3 159 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 COLEC12Q5KU26 742 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ESRP1Q6NXG1 681 aaKnown RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 C6orf89Q6UWU4 347 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ABHD15Q6UXT9 468 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 BRSK1Q8TDC3 778 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 TNKS2Q9H2K2 1166 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 CNTN3Q9P232 1028 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 OAZ3Q9UMX2 235 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 COQ4Q9Y3A0 265 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 E9PAM4 449 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 RLN2P04090 185 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 HMGN1P05114 100 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 SRPRAP08240 638 aaKnown RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 CHRNB2P17787 502 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 PIK3CBP42338 1070 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 HERVK_113P63132 956 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 FAM91A1Q658Y4 838 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 LINC00471Q8N535 108 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 GTPBP3Q969Y2 492 aaKnown RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 GPER1Q99527 375 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ERVK-6Q9BXR3 956 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 OXCT2Q9BYC2 517 aaPredicted RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 PPM1HQ9ULR3 514 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 RIC1Q4ADV7 1423 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 SLC15A5A6NIM6 579 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 KELP23276 732 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 NMBRP28336 390 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 DNASE1L1P49184 302 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 PPP3R1P63098 170 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 SLC9B1Q4ZJI4 515 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 SNX20Q7Z614 316 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 OR4C6Q8NH72 309 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 CEP76Q8TAP6 659 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 FEM1CQ96JP0 617 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 TMEM209Q96SK2 561 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 MAGEH1Q9H213 219 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 TBC1D17Q9HA65 648 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ACTR3BQ9P1U1 418 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 POFUT2Q9Y2G5 429 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 H3BSA7 217 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 GNB5O14775 395 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 CYP3A5P20815 502 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ERP29P30040 261 aaKnown RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 ZCCHC12Q6PEW1 402 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 IL31RAQ8NI17 732 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 CANT1Q8WVQ1 401 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 HSD3B7Q9H2F3 369 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 SOHLH2Q9NX45 425 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms