RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 PPP4R4Q6NUP7 873 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 PMF1Q6P1K2 205 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 MAMDC2Q7Z304 686 aaPredicted RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 GPR141Q7Z602 305 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 PELI3Q8N2H9 469 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 CALML6Q8TD86 181 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 KCTD13Q8WZ19 329 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 RCN3Q96D15 328 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 SLC45A3Q96JT2 553 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 AGAP3Q96P47 875 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 C9orf16Q9BUW7 83 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 KIFC1Q9BW19 673 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 PREBQ9HCU5 417 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 FAIMQ9NVQ4 179 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 UBAP1Q9NZ09 502 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 KLHL8Q9P2G9 620 aaPredicted RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 HSFX1Q9UBD0 423 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 TUBGCP4Q9UGJ1 667 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 HMGXB4Q9UGU5 601 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 ATXN7L1Q9ULK2 861 aaPredicted RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 MAGED2Q9UNF1 606 aaPredicted RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 SATB2Q9UPW6 733 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 SH3GLB1Q9Y371 365 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 OBSL1O75147 1896 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 NIPBLQ6KC79 2804 aaeCLIP8.77□□□□□ -1.01
GPN1-202ENST00000407583 DENND4CQ5VZ89 1909 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 TRAV19A0A0A6YYK7 116 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 A0A0J9YVX5 310 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ZCWPW2A0A1B0GU75 182 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 PMS2P1A4D2B8 440 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 M0QZQ0 153 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 EEF2KO00418 725 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 TRIM24O15164 1050 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ZSCAN9O15535 394 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 MFSD11O43934 449 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 SEMA7AO75326 666 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 CSO75390 466 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 DNAJB5O75953 348 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ANXA9O76027 345 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 SRP72O76094 671 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 PIGNO95427 931 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 GPIP06744 558 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 RBP1P09455 135 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 UMPSP11172 480 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ENO3P13929 434 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 HOXB4P17483 251 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 XRCC1P18887 633 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 PSMB4P28070 264 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 TUFMP49411 452 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 NME5P56597 212 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 RAB10P61026 200 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 STX1BP61266 288 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 POU4F1Q01851 419 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 CEACAM7Q14002 265 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 FAM83EQ2M2I3 478 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 XKR4Q5GH76 650 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 CDCP2Q5VXM1 449 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 LRRC8EQ6NSJ5 796 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 IGF2-ASQ6U949 168 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 NEK10Q6ZWH5 1172 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 KANSL1Q7Z3B3 1105 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 PATL1Q86TB9 770 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 ATCAYQ86WG3 371 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 LRRC49Q8IUZ0 686 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 CHPFQ8IZ52 775 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ADGRG2Q8IZP9 1017 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ZNF567Q8N184 647 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 METTL25Q8N6Q8 603 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ARL14EPQ8N8R7 260 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 DNAAF3Q8N9W5 541 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 BORCS5Q969J3 196 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 PGAP3Q96FM1 320 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 SLC46A1Q96NT5 459 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 PLEKHG4BQ96PX9 1271 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 OR52B2Q96RD2 323 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 TCF12Q99081 682 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 GABRG3Q99928 467 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 OXCT2Q9BYC2 517 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 COPS7BQ9H9Q2 264 aaPredicted RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 MEAF6Q9HAF1 191 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 PFDN4Q9NQP4 134 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 SLC38A7Q9NVC3 462 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 GDAP2Q9NXN4 497 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 DKK3Q9UBP4 350 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 ANAPC2Q9UJX6 822 aa8.76□□□□□ -1.01
GPN1-202ENST00000407583 PAIP2BQ9ULR5 123 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 UBQLN1Q9UMX0 589 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 MYO18AQ92614 2054 aaKnown RBP8.76□□□□□ -1.01
GPN1-202ENST00000407583 CCDC162PA2VCL2 907 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 C2orf78A6NCI8 922 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 TCAF2A6NFQ2 919 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.75□□□□□ -1.01
GPN1-202ENST00000407583 TARM1B6A8C7 271 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 PPEF2O14830 753 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 GRID2O43424 1007 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 CACNG3O60359 315 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 VPS4BO75351 444 aa8.75□□□□□ -1.01
GPN1-202ENST00000407583 EIF2S1P05198 315 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms