RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TPSD1Q9BZJ3 242 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 SLC6A17Q9H1V8 727 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 MARCOQ9UEW3 520 aaPredicted RBP20.61■□□□□ 0.89
TPM1-208ENST00000404484 A0A1W2PQU0 124 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 C8GP07360 202 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 ENO2P09104 434 aaPredicted RBP20.6■□□□□ 0.89
TPM1-208ENST00000404484 NDUFV2P19404 249 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 RPL14P50914 215 aaKnown RBP20.6■□□□□ 0.89
TPM1-208ENST00000404484 SP140Q13342 867 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 ZNF648Q5T619 568 aaPredicted RBP20.6■□□□□ 0.89
TPM1-208ENST00000404484 TMEM220Q6QAJ8 160 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 TRPM8Q7Z2W7 1104 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 ADGRG6Q86SQ4 1221 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 PELI3Q8N2H9 469 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 GBP7Q8N8V2 638 aaPredicted RBP20.6■□□□□ 0.89
TPM1-208ENST00000404484 HMGB4Q8WW32 186 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 GAB3Q8WWW8 586 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 OR2AG1Q9H205 316 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 RDH14Q9HBH5 336 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 VTI1BQ9UEU0 232 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 GPR34Q9UPC5 381 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 ZFR2Q9UPR6 939 aaKnown RBP20.6■□□□□ 0.89
TPM1-208ENST00000404484 TNPO3Q9Y5L0 923 aaKnown RBP20.6■□□□□ 0.89
TPM1-208ENST00000404484 CFAP54Q96N23 3096 aa20.6■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3DA0A087WVF3 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3IA0A087WXS9 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3EA0A087X179 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3KA0A087X1G2 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PABPN1LA6NDY0 278 aaKnown RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3FA6NER0 549 aaPredicted RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 CCT8L1PA6NM43 557 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 GPR89AB7ZAQ6 455 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3LB9A6J9 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 SLC16A5O15375 505 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 SUPT7LO94864 414 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 CHRNGP07510 517 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3HP0C7X1 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 GPR89BP0CG08 455 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 ALOX15P16050 662 aaPredicted RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 VCLP18206 1134 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 CTSCP53634 463 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 AQP5P55064 265 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PLOD1Q02809 727 aaPredicted RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 LPAL2Q16609 132 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 CDKL4Q5MAI5 379 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3GQ6DHY5 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3CQ6IPX1 549 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 CYHR1Q6ZMK1 362 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PRR23BQ6ZRT6 265 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 YTHDF3Q7Z739 585 aaKnown RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 HEATR4Q86WZ0 1026 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TRAPPC5Q8IUR0 188 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TBC1D3Q8IZP1 549 aaPredicted RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 ABCA7Q8IZY2 2146 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 ZNF781Q8N8C0 355 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 GLMNQ92990 594 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TMEM159Q96B96 161 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 FAR2Q96K12 515 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 C1QTNF3Q9BXJ4 246 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 SLC17A9Q9BYT1 436 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TRIM54Q9BYV2 358 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 KCNK13Q9HB14 408 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PNPOQ9NVS9 261 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 MBD1Q9UIS9 605 aaPredicted RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 INVSQ9Y283 1065 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 GON4LQ3T8J9 2241 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 GPC4O75487 556 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 SLCO2B1O94956 709 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 GABRG2P18507 467 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 CDK3Q00526 305 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PPP1R3AQ16821 1122 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 UNC50Q53HI1 259 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 ANKS6Q68DC2 871 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 CCDC121Q6ZUS5 278 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 LSMEM2Q8N112 164 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PLA2G15Q8NCC3 412 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PDPRQ8NCN5 879 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 LINC00615Q96LM1 132 aaPredicted RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 RMDN2Q96LZ7 410 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 GSTO2Q9H4Y5 243 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 WDR26Q9H7D7 661 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 PHPT1Q9NRX4 125 aaPredicted RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 DNAJC28Q9NX36 388 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 ATXN10Q9UBB4 475 aa20.59■□□□□ 0.89
TPM1-208ENST00000404484 TSR3Q9UJK0 312 aaKnown RBP20.59■□□□□ 0.89
TPM1-208ENST00000404484 LRRC72A6NJI9 287 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 LIN7AO14910 233 aaPredicted RBP20.58■□□□□ 0.88
TPM1-208ENST00000404484 FFAR2O15552 330 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 MPSTP25325 297 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 EEF1DP29692 281 aaKnown RBP20.58■□□□□ 0.88
TPM1-208ENST00000404484 IRF4Q15306 451 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 CEP68Q76N32 757 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 TRIM74Q86UV6 250 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 PGBD3Q8N328 593 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 BEND7Q8N7W2 519 aaPredicted RBP20.58■□□□□ 0.88
TPM1-208ENST00000404484 TP53I13Q8NBR0 393 aaPredicted RBP20.58■□□□□ 0.88
TPM1-208ENST00000404484 SKA2Q8WVK7 121 aaPredicted RBP20.58■□□□□ 0.88
TPM1-208ENST00000404484 LENG8Q96PV6 779 aaPredicted RBP20.58■□□□□ 0.88
TPM1-208ENST00000404484 LRRC37BQ96QE4 947 aa20.58■□□□□ 0.88
TPM1-208ENST00000404484 TEX101Q9BY14 249 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms