RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SLC30A3Q99726 388 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 TAS2R13Q9NYV9 303 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 VWA7Q9Y334 891 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 DHRS7Q9Y394 339 aa28.71■■■□□ 2.19
USP42-202ENST00000404008 TRBV23OR9-2A0A075B6M9 112 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 OR52A4PA6NMU1 304 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 FDXRP22570 491 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 LIMK2P53671 638 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 GBX1Q14549 363 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 UAP1Q16222 522 aaPredicted RBP28.7■■■□□ 2.18
USP42-202ENST00000404008 PDZD3Q86UT5 571 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 CD200R1Q8TD46 325 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 SLC44A1Q8WWI5 657 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 MRRFQ96E11 262 aaKnown RBP28.7■■■□□ 2.18
USP42-202ENST00000404008 ELMO2Q96JJ3 720 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 OLFM1Q99784 485 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 SLC32A1Q9H598 525 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 ZNF624Q9P2J8 865 aaPredicted RBP28.7■■■□□ 2.18
USP42-202ENST00000404008 PADI4Q9UM07 663 aa28.7■■■□□ 2.18
USP42-202ENST00000404008 GOLGA4Q13439 2230 aaKnown RBP28.7■■■□□ 2.18
USP42-202ENST00000404008 XRCC1P18887 633 aaPredicted RBP28.69■■■□□ 2.18
USP42-202ENST00000404008 SPRP35270 261 aaPredicted RBP28.69■■■□□ 2.18
USP42-202ENST00000404008 DAB2P98082 770 aa28.69■■■□□ 2.18
USP42-202ENST00000404008 RPE65Q16518 533 aa28.69■■■□□ 2.18
USP42-202ENST00000404008 PIM3Q86V86 326 aa28.69■■■□□ 2.18
USP42-202ENST00000404008 INSM2Q96T92 566 aaPredicted RBP28.69■■■□□ 2.18
USP42-202ENST00000404008 GPR22Q99680 433 aa28.69■■■□□ 2.18
USP42-202ENST00000404008 MTO1Q9Y2Z2 717 aaKnown RBP28.69■■■□□ 2.18
USP42-202ENST00000404008 EXOC1LA0A1B0GW35 172 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 CKMT2P17540 419 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 HSD17B3P37058 310 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 SKIV2L2P42285 1042 aaKnown RBP28.68■■■□□ 2.18
USP42-202ENST00000404008 FASLGP48023 281 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 UBE2IP63279 158 aaKnown RBP28.68■■■□□ 2.18
USP42-202ENST00000404008 UGT3A1Q6NUS8 523 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 INPP5DQ92835 1189 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 C12orf66Q96MD2 445 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 PAFAH2Q99487 392 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 EVA1BQ9NVM1 165 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 CPNE7Q9UBL6 633 aa28.68■■■□□ 2.18
USP42-202ENST00000404008 TRMT6Q9UJA5 497 aaKnown RBP28.68■■■□□ 2.18
USP42-202ENST00000404008 CTIFO43310 598 aaKnown RBP28.67■■■□□ 2.18
USP42-202ENST00000404008 TNFSF14O43557 240 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 MTHFD1P11586 935 aaKnown RBP28.67■■■□□ 2.18
USP42-202ENST00000404008 ACADLP28330 430 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 ATP5DP30049 168 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 SLC19A1P41440 591 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 DUSP3P51452 185 aaPredicted RBP28.67■■■□□ 2.18
USP42-202ENST00000404008 DNAJC3Q13217 504 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 TTLL9Q3SXZ7 439 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 GUSBP11Q6P575 273 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 GLRX5Q86SX6 157 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 SLC9B2Q86UD5 537 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 SPNS2Q8IVW8 549 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 RTKNQ9BST9 563 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 CFAP20Q9Y6A4 193 aaKnown RBP28.67■■■□□ 2.18
USP42-202ENST00000404008 RNF215Q9Y6U7 377 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 SPEGQ15772 3267 aa28.67■■■□□ 2.18
USP42-202ENST00000404008 EME2A4GXA9 379 aaPredicted RBP28.66■■■□□ 2.18
USP42-202ENST00000404008 POC1B-GALNT4F8VUJ3 575 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 IFRD1O00458 451 aaPredicted RBP28.66■■■□□ 2.18
USP42-202ENST00000404008 NUDT21O43809 227 aaKnown RBP28.66■■■□□ 2.18
USP42-202ENST00000404008 ITGA2BP08514 1039 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 GLB1P16278 677 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 ACP1P24666 158 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 HOXD11P31277 338 aaPredicted RBP28.66■■■□□ 2.18
USP42-202ENST00000404008 POU4F1Q01851 419 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 TRIP6Q15654 476 aaKnown RBP28.66■■■□□ 2.18
USP42-202ENST00000404008 MAP9Q49MG5 647 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 ACSBG2Q5FVE4 666 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 CHCHD2P9Q5T1J5 151 aaPredicted RBP28.66■■■□□ 2.18
USP42-202ENST00000404008 AVL9Q8NBF6 648 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 OR6C4Q8NGE1 309 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 IMP3Q9NV31 184 aaKnown RBP28.66■■■□□ 2.18
USP42-202ENST00000404008 PCNX2A6NKB5 2137 aa28.66■■■□□ 2.18
USP42-202ENST00000404008 INHBAP08476 426 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 SAT1P21673 171 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 PGGT1BP53609 377 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 TAS2R39P59534 338 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 HHEXQ03014 270 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 PDAP1Q13442 181 aaKnown RBP28.65■■■□□ 2.18
USP42-202ENST00000404008 TRIM48Q8IWZ4 208 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 MREGQ8N565 214 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 NAT6Q93015 286 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 CXorf40BQ96DE9 158 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 DHRS4Q9BTZ2 278 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 POT1Q9NUX5 634 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 LRIT1Q9P2V4 623 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 FETUBQ9UGM5 382 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 SLC39A10Q9ULF5 831 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 IKBKGQ9Y6K9 419 aa28.65■■■□□ 2.18
USP42-202ENST00000404008 CPED1A4D0V7 1026 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 PPM1DO15297 605 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 GCAP28676 217 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 MSH2P43246 934 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 DUS1LQ6P1R4 473 aaKnown RBP28.64■■■□□ 2.18
USP42-202ENST00000404008 PAQR3Q6TCH7 311 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 EFL1Q7Z2Z2 1120 aaKnown RBP28.64■■■□□ 2.18
USP42-202ENST00000404008 ZNF438Q7Z4V0 828 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 CPNE9Q8IYJ1 553 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms